Propagation of HcpR regulog to Desulfovibrio magneticus RS-1
| Source regulog: | HcpR - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/delta |
| Propagated regulon: | |
| Target genome | Desulfovibrio magneticus RS-1 |
| Orthologous TF(s) | DMR_35320 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -64
Score: 5 Sequence: ATTTGACTTAGGTCATGT
Locus tag: DMR_12610
|
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| DMR_12610 | -64 | 5 | ATTTGACTTAGGTCATGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DMR_12610 | ||||
| Ortholog function: hypothetical protein | ||||
| Desulfovibrio magneticus RS-1 | DMR_12610 | -64 | 5 | ATTTGACTTAGGTCATGT |
|
Position: -41
Score: 5.3 Sequence: CCTTGACTTACGTCAAGC
Locus tag: DMR_35320
|
||||
| DMR_35320 | -41 | 5.3 | CCTTGACTTACGTCAAGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hcpR | ||||
| Ortholog function: Nitric oxide-resposive transcriptional regulator HcpR, Crp family | ||||
| Desulfovibrio salexigens DSM 2638 | Desal_2853 | -51 | 3.9 | CCCTGACTTAAGTCATTT |
| Desulfovibrio magneticus RS-1 | DMR_35320 | -41 | 5.3 | CCTTGACTTACGTCAAGC |
|
Position: -93
Score: 5.3 Sequence: GCTTGACGTAAGTCAAGG
Locus tag: DMR_35330
|
||||
| DMR_35330 | -93 | 5.3 | GCTTGACGTAAGTCAAGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: DVU1080 | ||||
| Ortholog function: nitrite and sulphite reductase 4Fe-4S region | ||||
| Desulfovibrio vulgaris Hildenborough | DVU1080 | -234 | 4.4 | GTGTGACCCGCGTCACAG |
| Desulfovibrio desulfuricans G20 | Dde_2390 | -80 | 4.5 | ATGTGACCTGCATCACAG |
| Desulfovibrio salexigens DSM 2638 | Desal_2852 | -77 | 4 | AAATGACTTAAGTCAGGG |
| Desulfovibrio magneticus RS-1 | DMR_35330 | -93 | 5.3 | GCTTGACGTAAGTCAAGG |
| Desulfomicrobium baculatum DSM 4028 | Dbac_1379 | -52 | 6.1 | TTTTGACCTAGGTCAAGG |
|
Position: -94
Score: 5.8 Sequence: TTTTGACTTAGGTCAAAC
Locus tag: DMR_35370
|
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| DMR_35370 | -94 | 5.8 | TTTTGACTTAGGTCAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hcp | ||||
| Ortholog function: Hydroxylamine reductase (EC 1.7.-.-) | ||||
| Desulfovibrio vulgaris Hildenborough | DVU2543 | -184 | 4.8 | ATTTGACGCACGTCACAA |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_0988 | -211 | 4.7 | TTTTGATGTCCGTCACAT |
| Desulfovibrio desulfuricans G20 | Dde_2641 | -153 | 4.6 | TTGTGACTCCGGTCACAT |
| Desulfovibrio salexigens DSM 2638 | Desal_2849 | -238 | 5.1 | CCTTGACCTGAATCAAAT |
| -88 | 5.2 | TTTTGATCTGAATCAAAT | ||
| Desulfovibrio magneticus RS-1 | DMR_35370 | -94 | 5.8 | TTTTGACTTAGGTCAAAC |
| Desulfomicrobium baculatum DSM 4028 | Dbac_0596 | -94 | 5.6 | TTTTGATCTGCGTCAAAG |
| Desulfomicrobium baculatum DSM 4028 | Dbac_2941 | -82 | 5.5 | TTTTGATCCAGCTCAAAG |
| Desulfohalobium retbaense DSM 5692 | Dret_2386 | -121 | 6 | TTTTGACTCAGGTCAAAG |