Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FliA regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: FliA - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_23910
Regulated genes 7
Built upon 64 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -127
Score: 7
Sequence: TAAAGAAC-(12)-GTCGATAT
Locus tag: DMR_03990
DMR_03990 -127 7 TAAAGAAC-(12)-GTCGATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hag
Ortholog function: flagellin domain protein
Desulfovibrio magneticus RS-1 DMR_03990 -127 7 TAAAGAAC-(12)-GTCGATAT
Position: -223
Score: 7.3
Sequence: TAAAGGGT-(11)-GCCGATAG
Locus tag: DMR_12500
DMR_12500 -223 7.3 TAAAGGGT-(11)-GCCGATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliC
Ortholog function: flagellin
Desulfovibrio magneticus RS-1 DMR_12500 -223 7.3 TAAAGGGT-(11)-GCCGATAG
Position: -63
Score: 7.9
Sequence: TAAAGATT-(11)-GCCGATGG
Locus tag: DMR_17600
DMR_17600 -63 7.9 TAAAGATT-(11)-GCCGATGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DMR_17600
Ortholog function: hypothetical protein
Desulfovibrio magneticus RS-1 DMR_17600 -63 7.9 TAAAGATT-(11)-GCCGATGG
Position: -90
Score: 8.1
Sequence: TAAAGACT-(12)-GCCGATAA
Locus tag: DMR_33980
DMR_33980 -90 8.1 TAAAGACT-(12)-GCCGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_0030
Ortholog function: Anti-sigma-28 factor FlgM family protein
Desulfovibrio magneticus RS-1 DMR_33980 -90 8.1 TAAAGACT-(12)-GCCGATAA