Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HrcA regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: HrcA - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_17390
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -65
Score: 5.9
Sequence: CTGGCACTCGCCGCAAGCGAGTGCCAG
Locus tag: DMR_02720
DMR_02720 -65 5.9 CTGGCACTCGCCGCAAGCGAGTGCCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Desulfovibrio magneticus RS-1 DMR_02720 -65 5.9 CTGGCACTCGCCGCAAGCGAGTGCCAG
Desulfomicrobium baculatum DSM 4028 Dbac_2625 -76 5.9 TTGGCACTCCCCATTGCCGAGCGCCAA
Desulfohalobium retbaense DSM 5692 Dret_2175 -69 6.8 TTAGCACTCCCCTGACAGGAGTGCTAA
Position: -40
Score: 5.8
Sequence: TTGGCACTCGAAAGCCACGAGTGCCAA
Locus tag: DMR_17390
DMR_17390 -40 5.8 TTGGCACTCGAAAGCCACGAGTGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hrcA
Ortholog function: Heat shock response transcriptional regulator HrcA, HrcA family
Desulfovibrio magneticus RS-1 DMR_17390 -40 5.8 TTGGCACTCGAAAGCCACGAGTGCCAA