Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SahR regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: SahR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process: Methionine metabolism
Effector: S-adenosylhomocysteine
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_43430
Regulated genes 1
Built upon 31 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -26
Score: 4
Sequence: AAACCCGCATATCAGGATAT
Position: -18
Score: 6.7
Sequence: ATATCAGGATATCTTGATAT
Position: -10
Score: 3.7
Sequence: ATATCTTGATATGCTCAAAA
Locus tag: DMR_43430
DMR_43430 -26 4 AAACCCGCATATCAGGATAT
-18 6.7 ATATCAGGATATCTTGATAT
-10 3.7 ATATCTTGATATGCTCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sahR
Ortholog function: Predicted regulator of methionine metabolism, ArsR family
Desulfovibrio vulgaris Hildenborough DVU0606 -52 5.9 ACATCAAGTTTTCTTGATTT
Desulfovibrio desulfuricans G20 Dde_3135 63 5.3 ACATCAACTTTTCTTGATTC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0040 -57 5.4 ATATGCGGATAACTTGATAC
-35 5 GTATCAGCATAAATTGATTT
Desulfovibrio piger ATCC 29098 DESPIG_01931 -83 5.8 ATATCCAGATAGGCTGATAT
-61 4.1 GCATCAAGCAAATTTGATAC
Desulfovibrio salexigens DSM 2638 Desal_3078 -39 3.7 ATATAAAGGTTTTGTTATGT
Desulfovibrio magneticus RS-1 DMR_43430 -18 6.7 ATATCAGGATATCTTGATAT
Desulfomicrobium baculatum DSM 4028 Dbac_2305 -45 6.7 ATATCAGGATATCTTGATAT
Desulfohalobium retbaense DSM 5692 Dret_2302 -172 4.7 TTATCAACTTTTTCAGATAT