Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhoB regulog to Desulfovibrio magneticus RS-1

Reference regulog properties
Source regulog: PhoB - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio magneticus RS-1
Orthologous TF(s) DMR_02640
Regulated genes 7
Built upon 95 sites [see more]
Predicted regulatory interactions in Desulfovibrio magneticus RS-1
Locus tag Position Score Sequence
Position: -116
Score: 5.3
Sequence: TTGTCACGAGATTGTCAC
Locus tag: DMR_08630
DMR_08630 -116 5.3 TTGTCACGAGATTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0013
Ortholog function: Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)
Desulfovibrio salexigens DSM 2638 Desal_0095 -198 5.2 TTGTAACTGTATTGTAAC
-68 4.4 TTGTTACTCCCCTGTGAC
Desulfovibrio magneticus RS-1 DMR_08630 -116 5.3 TTGTCACGAGATTGTCAC
-31 3.9 TCGTCACGCTTCTGCCAT
Position: -62
Score: 4.2
Sequence: CCGACGCGCTATTGTCAC
Locus tag: DMR_24190
DMR_24190 -62 4.2 CCGACGCGCTATTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DMR_24190
Ortholog function: Radical SAM domain protein
Desulfovibrio magneticus RS-1 DMR_24190 -62 4.2 CCGACGCGCTATTGTCAC
Desulfomicrobium baculatum DSM 4028 Dbac_2695 -107 5.2 CTGTCACGGAACTGTGAC
-96 4.5 CTGTGACGCAAATGTCAC