Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of DVUA0100 regulog to Desulfovibrio piger ATCC 29098

Reference regulog properties
Source regulog: DVUA0100 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio piger ATCC 29098
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Desulfovibrio piger ATCC 29098
Locus tag Position Score Sequence
Position: -216
Score: 4.5
Sequence: GCCAACATTTTTGAT
Locus tag: DESPIG_00689
DESPIG_00689 -216 4.5 GCCAACATTTTTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVUA0106
Ortholog function: Type III secretion outermembrane contact sensing protein (YopN,Yop4b,LcrE) / Type III secretion outermembrane negative regulator of secretion (TyeA)
Desulfovibrio vulgaris Hildenborough DVUA0106 -549 5.4 GCCAACATCGTTGCC
-517 4.5 GGCAGTGTTGTTGGC
-227 4.3 TGCAACGTTGTTGCT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2419 -437 4.2 GGCAACGACCTTGCC
-422 4.8 TCCAACAACGTTAGC
-402 4.1 GACAATGATGTTGCA
-177 4.1 GTCAACCGTTTTGCC
Desulfovibrio piger ATCC 29098 DESPIG_00689 -216 4.5 GCCAACATTTTTGAT
Position: -119
Score: 4.5
Sequence: ATCAAAAATGTTGGC
Locus tag: DESPIG_00690
DESPIG_00690 -119 4.5 ATCAAAAATGTTGGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2420
Ortholog function: hypothetical protein
Desulfovibrio vulgaris Hildenborough null -204 4.5 GCCAACAACACTGCC
-172 5.4 GGCAACGATGTTGGC
Desulfovibrio piger ATCC 29098 DESPIG_00690 -254 4.2 GCAAACACCATTGCC
-119 4.5 ATCAAAAATGTTGGC
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