Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhoB regulog to Desulfovibrio salexigens DSM 2638

Reference regulog properties
Source regulog: PhoB - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio salexigens DSM 2638
Orthologous TF(s) Desal_3695
Regulated genes 8
Built upon 95 sites [see more]
Predicted regulatory interactions in Desulfovibrio salexigens DSM 2638
Locus tag Position Score Sequence
Position: -198
Score: 5.2
Sequence: TTGTAACTGTATTGTAAC
Locus tag: Desal_0095
Desal_0095 -198 5.2 TTGTAACTGTATTGTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0013
Ortholog function: Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3)
Desulfovibrio salexigens DSM 2638 Desal_0095 -198 5.2 TTGTAACTGTATTGTAAC
-68 4.4 TTGTTACTCCCCTGTGAC
Desulfovibrio magneticus RS-1 DMR_08630 -116 5.3 TTGTCACGAGATTGTCAC
-31 3.9 TCGTCACGCTTCTGCCAT
Position: -232
Score: 4.3
Sequence: TTGTCACTAATTTGTATT
Locus tag: Desal_1742
Desal_1742 -232 4.3 TTGTCACTAATTTGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_1216
Ortholog function: Alkaline phosphatase (EC 3.1.3.1)
Desulfovibrio desulfuricans G20 Dde_1216 -95 5.1 CTGTCATTCTGTTGTCAC
Desulfovibrio salexigens DSM 2638 Desal_1742 -232 4.3 TTGTCACTAATTTGTATT
Desulfovibrio magneticus RS-1 DMR_08520 -65 4.2 ACGCCACGGGTTCGTCAC
Desulfohalobium retbaense DSM 5692 Dret_2292 -102 3.9 GCGCCATGCCTGTGTCAC
Position: -84
Score: 4.4
Sequence: TCGTTACAAAGTTGTATC
Locus tag: Desal_2167
Desal_2167 -84 4.4 TCGTTACAAAGTTGTATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_2167
Ortholog function: methyl-accepting chemotaxis sensory transducer
Desulfovibrio salexigens DSM 2638 Desal_2167 -95 4.3 GTGTTACATTATCGTTAC
-84 4.4 TCGTTACAAAGTTGTATC
Position: -83
Score: 3.9
Sequence: TCGTCATCGAATCTTTAC
Locus tag: Desal_3087
Desal_3087 -83 3.9 TCGTCATCGAATCTTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_3087
Ortholog function: hypothetical protein
Desulfovibrio salexigens DSM 2638 Desal_3087 -83 3.9 TCGTCATCGAATCTTTAC
Desulfomicrobium baculatum DSM 4028 Dbac_2702 -107 5.2 CTGTCACGGAACTGTGAC
-96 4.5 CTGTGACGCAAATGTCAC
Desulfohalobium retbaense DSM 5692 Dret_1982 -203 5.4 GCGTCATAGCATTGTCAC
Position: -144
Score: 4.8
Sequence: GAGTCATTGCTCTGTAAC
Locus tag: Desal_3392
Desal_3392 -144 4.8 GAGTCATTGCTCTGTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_3392
Ortholog function: phosphate ABC transporter, ATPase subunit
Desulfovibrio salexigens DSM 2638 Desal_3392 -166 4.4 GCGTAACATAAACGTAAC
-144 4.8 GAGTCATTGCTCTGTAAC
Desulfomicrobium baculatum DSM 4028 Dbac_2660 -98 5.5 GTGTCACAATGCTGTCAC
Position: -85
Score: 4
Sequence: TCCTTACCTGATTGTCAC
Locus tag: Desal_3694
Desal_3694 -85 4 TCCTTACCTGATTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DESPIG_03038
Ortholog function: PAS/PAC sensor signal transduction histidine kinase
Desulfovibrio salexigens DSM 2638 Desal_3694 -85 4 TCCTTACCTGATTGTCAC
-76 3.8 AATTAACATAGTTGTAAC
Desulfomicrobium baculatum DSM 4028 Dbac_2661 -98 5.5 GTGTCACAATGCTGTCAC
© 2009-2020 RegPrecise