Propagation of HmcR regulog to Desulfovibrio salexigens DSM 2638
| Source regulog: | HmcR - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | |
| Biological process: | Energy metabolism |
| Effector: | |
| Phylum: | Proteobacteria/delta |
| Propagated regulon: | |
| Target genome | Desulfovibrio salexigens DSM 2638 |
| Orthologous TF(s) | Desal_2987, Desal_1368 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -226
Score: 5.5 Sequence: TAACATACCTATCGAGCAGGTAT
Position: -201
Score: 4.7 Sequence: AAACCTATCTATTGAGGAGGTAT
Position: -176
Score: 4.5 Sequence: ATACCAACCCGATGGATGGGAAA
Locus tag: Desal_1378
|
||||
| Desal_1378 | -226 | 5.5 | TAACATACCTATCGAGCAGGTAT | |
| -201 | 4.7 | AAACCTATCTATTGAGGAGGTAT | ||
| -176 | 4.5 | ATACCAACCCGATGGATGGGAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmcA | ||||
| Ortholog function: High-molecular-weight cytochrome c precursor | ||||
| Desulfohalobium retbaense DSM 5692 | Dret_0877 | -158 | 5.1 | TCGCCTACTCAGCCGGTAGGTTT |
| -133 | 5.5 | ATACCTACCACTGAAGTAGGATT | ||
| Desulfomicrobium baculatum DSM 4028 | Dbac_0568 | -194 | 4.6 | TTCTATACCTCCGAGGTCGGAAT |
| Desulfovibrio desulfuricans G20 | Dde_0653 | -291 | 6 | TCGCATACCTCAGCGGTAGGAAA |
| -266 | 5.5 | AATCATACCATGCAGGTAGGGTA | ||
| Desulfovibrio salexigens DSM 2638 | Desal_1378 | -226 | 5.5 | TAACATACCTATCGAGCAGGTAT |
| -201 | 4.7 | AAACCTATCTATTGAGGAGGTAT | ||
| -176 | 4.5 | ATACCAACCCGATGGATGGGAAA | ||
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2598 | -346 | 6 | TCGCATACCCCTCCGGTAGGAAT |
| -321 | 5.9 | TTCCATACCCTAGAAGTAGGGTA | ||