Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhnF regulog to Desulfomicrobium baculatum DSM 4028

Reference regulog properties
Source regulog: PhnF - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Phosphonate utilization
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfomicrobium baculatum DSM 4028
Orthologous TF(s) Dbac_0812
Regulated genes 3
Built upon 5 sites [see more]
Predicted regulatory interactions in Desulfomicrobium baculatum DSM 4028
Locus tag Position Score Sequence
Position: -79
Score: 5.2
Sequence: ATTTGTATAGACATCT
Locus tag: Dbac_0812
Dbac_0812 -79 5.2 ATTTGTATAGACATCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnF
Ortholog function: Transcriptional regulator for phosphonate utilization, GntR family
Desulfomicrobium baculatum DSM 4028 Dbac_0812 -79 5.2 ATTTGTATAGACATCT
Desulfovibrio desulfuricans G20 Dde_3327 -112 5.6 GGTTGTCTAGATAACT
Position: -39
Score: 5.2
Sequence: AGATGTCTATACAAAT
Locus tag: Dbac_0813
Dbac_0813 -39 5.2 AGATGTCTATACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnG
Ortholog function: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Desulfomicrobium baculatum DSM 4028 Dbac_0813 -39 5.2 AGATGTCTATACAAAT
Desulfovibrio desulfuricans G20 Dde_3328 -40 5.7 AGTTATCTAGACAACC
Position: -93
Score: 5.7
Sequence: AGTTGTCTAGACCACT
Locus tag: Dbac_0829
Dbac_0829 -93 5.7 AGTTGTCTAGACCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: phnC
Ortholog function: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
Desulfomicrobium baculatum DSM 4028 Dbac_0829 -93 5.7 AGTTGTCTAGACCACT
© 2009-2020 RegPrecise