Propagation of RpoH regulog to Desulfomicrobium baculatum DSM 4028
| Source regulog: | RpoH - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | Sigma70 |
| Regulation mode: | |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Proteobacteria/delta |
| Propagated regulon: | |
| Target genome | Desulfomicrobium baculatum DSM 4028 |
| Orthologous TF(s) | Dbac_1859 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -47
Score: 5.7 Sequence: TTTCAAA-(14)-CCCTAT
Locus tag: Dbac_0199
|
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| Dbac_0199 | -47 | 5.7 | TTTCAAA-(14)-CCCTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpP | ||||
| Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | ||||
| Desulfovibrio desulfuricans G20 | Dde_2220 | -81 | 6.6 | CTTGAAC-(12)-CCCGAT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0691 | -159 | 5.4 | CCCGAAA-(11)-GCCGAT |
| Desulfovibrio magneticus RS-1 | DMR_28170 | -135 | 5.9 | CCTGAAG-(12)-CCGGAT |
| -77 | 5.2 | CCGGAAG-(11)-CCCGAT | ||
| Desulfohalobium retbaense DSM 5692 | Dret_0511 | -186 | 4.8 | CTGGAAA-(14)-ACTGAT |
|
Position: -213
Score: 6.6 Sequence: CTTGACT-(14)-CCCGAT
Locus tag: Dbac_2625
|
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| Dbac_2625 | -213 | 6.6 | CTTGACT-(14)-CCCGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: groES | ||||
| Ortholog function: Heat shock protein 60 family co-chaperone GroES | ||||
| Desulfovibrio magneticus RS-1 | DMR_02720 | -55 | 3.7 | CCGCAAG-(12)-GCCAAT |
|
Position: -58
Score: 5.4 Sequence: CATGAAC-(14)-GCGCAT
Locus tag: Dbac_3477
|
||||
| Dbac_3477 | -58 | 5.4 | CATGAAC-(14)-GCGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Dde_0249 | ||||
| Ortholog function: Molybdenum cofactor biosynthesis enzyme | ||||
| Desulfovibrio desulfuricans G20 | Dde_0249 | -271 | 4.3 | CCGGAAA-(11)-GCACAT |
| 99 | 5.2 | CCTGACA-(14)-CCCGAA | ||