Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpoH regulog to Desulfomicrobium baculatum DSM 4028

Reference regulog properties
Source regulog: RpoH - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma70
Regulation mode:
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfomicrobium baculatum DSM 4028
Orthologous TF(s) Dbac_1859
Regulated genes 6
Built upon 20 sites [see more]
Predicted regulatory interactions in Desulfomicrobium baculatum DSM 4028
Locus tag Position Score Sequence
Position: -47
Score: 5.7
Sequence: TTTCAAA-(14)-CCCTAT
Locus tag: Dbac_0199
Dbac_0199 -47 5.7 TTTCAAA-(14)-CCCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpP
Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92)
Desulfovibrio desulfuricans G20 Dde_2220 -81 6.6 CTTGAAC-(12)-CCCGAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0691 -159 5.4 CCCGAAA-(11)-GCCGAT
Desulfovibrio magneticus RS-1 DMR_28170 -135 5.9 CCTGAAG-(12)-CCGGAT
-77 5.2 CCGGAAG-(11)-CCCGAT
Desulfohalobium retbaense DSM 5692 Dret_0511 -186 4.8 CTGGAAA-(14)-ACTGAT
Position: -213
Score: 6.6
Sequence: CTTGACT-(14)-CCCGAT
Locus tag: Dbac_2625
Dbac_2625 -213 6.6 CTTGACT-(14)-CCCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: groES
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Desulfovibrio magneticus RS-1 DMR_02720 -55 3.7 CCGCAAG-(12)-GCCAAT
Position: -58
Score: 5.4
Sequence: CATGAAC-(14)-GCGCAT
Locus tag: Dbac_3477
Dbac_3477 -58 5.4 CATGAAC-(14)-GCGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_0249
Ortholog function: Molybdenum cofactor biosynthesis enzyme
Desulfovibrio desulfuricans G20 Dde_0249 -271 4.3 CCGGAAA-(11)-GCACAT
99 5.2 CCTGACA-(14)-CCCGAA