Propagation of SahR regulog to Desulfovibrio vulgaris str. DP4
| Source regulog: | SahR - Desulfovibrionales |
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Methionine metabolism |
| Effector: | S-adenosylhomocysteine |
| Phylum: | Proteobacteria/delta |
| Propagated regulon: | |
| Target genome | Desulfovibrio vulgaris str. DP4 |
| Orthologous TF(s) | Dvul_2348 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -320
Score: 5.1 Sequence: TTGACAGGATATATTGATAT
Position: -304
Score: 5.3 Sequence: ATATCAGTATTTCCTGATGT
Locus tag: Dvul_0025
|
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| Dvul_0025 | -320 | 5.1 | TTGACAGGATATATTGATAT | |
| -304 | 5.3 | ATATCAGTATTTCCTGATGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metE | ||||
| Ortholog function: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) | ||||
| Desulfovibrio vulgaris Hildenborough | DVU3371 | -341 | 5.3 | ATATCAGTATTTCCTGATGT |
| Desulfovibrio desulfuricans G20 | Dde_2328 | -293 | 4.4 | ATATTGATGAATCTTGATAT |
| Desulfovibrio salexigens DSM 2638 | Desal_0813 | -282 | 4.8 | ATATAACAATATTTTTATAT |
| -274 | 4.2 | ATATTTTTATATATTGAATT | ||
|
Position: -18
Score: 5.8 Sequence: ATATGTGGATAGGTTGATAT
Locus tag: Dvul_0787
|
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| Dvul_0787 | -18 | 5.8 | ATATGTGGATAGGTTGATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: panC | ||||
| Ortholog function: Pantoate--beta-alanine ligase (EC 6.3.2.1) | ||||
| Desulfovibrio vulgaris Hildenborough | DVU2448 | -18 | 5.8 | ATATGTGGATAGGTTGATAT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_2942 | -18 | 5.4 | ATATTCGGATAACTTGATAT |
| Desulfovibrio desulfuricans G20 | Dde_1498 | -18 | 5.9 | ATATGCGGATACATTGATAT |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_2286 | -18 | 5.8 | ATATCACAATACCTTGATAT |
| -10 | 4.2 | ATACCTTGATATGCAGATAT | ||
| Desulfovibrio piger ATCC 29098 | DESPIG_01871 | -18 | 6.1 | ATATCACCATACCTTGATAT |
| -10 | 4.2 | ATACCTTGATATGCAGATAT | ||
|
Position: -87
Score: 6.4 Sequence: ATATCAATCTATCTTGATAT
Locus tag: Dvul_1992
|
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| Dvul_1992 | -87 | 6.4 | ATATCAATCTATCTTGATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metF | ||||
| Ortholog function: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | ||||
| Desulfovibrio vulgaris Hildenborough | DVU0997 | -87 | 6.4 | ATATCAATCTATCTTGATAT |
| Desulfovibrio vulgaris str. Miyazaki F | DvMF_3034 | -208 | 6.6 | ATATCAAGATAGCTTGATAT |
| Desulfovibrio desulfuricans G20 | Dde_2525 | -69 | 4.5 | ATATTACAATAGGTCGATAT |
| -45 | 6.2 | ATATAAGGCTATCTTGATAT | ||
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_2008 | -80 | 6.5 | ATATCAATTTATCTTGATAT |
| Desulfovibrio piger ATCC 29098 | DESPIG_02490 | -73 | 6.2 | TTATCAAGTTATATTGATAT |
| Desulfovibrio salexigens DSM 2638 | Desal_0814 | -282 | 4.8 | ATATAACAATATTTTTATAT |
| -274 | 4.2 | ATATTTTTATATATTGAATT | ||
|
Position: -52
Score: 5.9 Sequence: ACATCAAGTTTTCTTGATTT
Locus tag: Dvul_2348
|
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| Dvul_2348 | -52 | 5.9 | ACATCAAGTTTTCTTGATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sahR | ||||
| Ortholog function: Predicted regulator of methionine metabolism, ArsR family | ||||
| Desulfovibrio vulgaris Hildenborough | DVU0606 | -52 | 5.9 | ACATCAAGTTTTCTTGATTT |
| Desulfovibrio desulfuricans G20 | Dde_3135 | 63 | 5.3 | ACATCAACTTTTCTTGATTC |
| Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 | Ddes_0040 | -57 | 5.4 | ATATGCGGATAACTTGATAC |
| -35 | 5 | GTATCAGCATAAATTGATTT | ||
| Desulfovibrio piger ATCC 29098 | DESPIG_01931 | -83 | 5.8 | ATATCCAGATAGGCTGATAT |
| -61 | 4.1 | GCATCAAGCAAATTTGATAC | ||
| Desulfovibrio salexigens DSM 2638 | Desal_3078 | -39 | 3.7 | ATATAAAGGTTTTGTTATGT |
| Desulfovibrio magneticus RS-1 | DMR_43430 | -18 | 6.7 | ATATCAGGATATCTTGATAT |
| Desulfomicrobium baculatum DSM 4028 | Dbac_2305 | -45 | 6.7 | ATATCAGGATATCTTGATAT |
| Desulfohalobium retbaense DSM 5692 | Dret_2302 | -172 | 4.7 | TTATCAACTTTTTCAGATAT |