Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ZraR regulog to Lawsonia intracellularis PHE/MN1-00

Reference regulog properties
Source regulog: ZraR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Zinc homeostasis
Effector: Zinc ion, (Zn2+)
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Lawsonia intracellularis PHE/MN1-00
Orthologous TF(s) LI1079
Regulated genes 2
Built upon 24 sites [see more]
Predicted regulatory interactions in Lawsonia intracellularis PHE/MN1-00
Locus tag Position Score Sequence
Position: -19
Score: 5.5
Sequence: TGTATAAAAAATATACA
Locus tag: LI1078
LI1078 -19 5.5 TGTATAAAAAATATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zraS
Ortholog function: Sensor protein of zinc sigma-54-dependent two-component system
Desulfovibrio vulgaris Hildenborough DVU3382 -414 4.8 CGTATGAAAATGATACA
-382 5 TGTATAAAAAATATACT
-74 5 TGTATGAAAAATAGACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2148 -110 5.1 TGTATAAAAACTATACG
-78 4.6 CGTATGAAAATCGAACA
Lawsonia intracellularis PHE/MN1-00 LI1078 -19 5.5 TGTATAAAAAATATACA
Position: 13
Score: 4.9
Sequence: TGTATGAGTTTTATACA
Locus tag: LI1080
LI1080 13 4.9 TGTATGAGTTTTATACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LI1080
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1704 -228 4.1 TGTTTTATTAGTAGACA
Lawsonia intracellularis PHE/MN1-00 LI1080 13 4.9 TGTATGAGTTTTATACA