Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Lawsonia intracellularis PHE/MN1-00

Reference regulog properties
Source regulog: Fur - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Lawsonia intracellularis PHE/MN1-00
Orthologous TF(s) LI0035
Regulated genes 5
Built upon 193 sites [see more]
Predicted regulatory interactions in Lawsonia intracellularis PHE/MN1-00
Locus tag Position Score Sequence
Position: -270
Score: 4.4
Sequence: TTGAATTTGAAATGCTT
Locus tag: LI0650
LI0650 -270 4.4 TTGAATTTGAAATGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pep
Ortholog function: metalloprotease, iron-related
Desulfovibrio desulfuricans G20 Dde_2677 -284 4.6 CTGGTTTTCATTATCAT
-280 4.1 TTCAGACTGGTTTTCAT
Desulfovibrio salexigens DSM 2638 Desal_0032 -223 4.8 TTTAAATTCAAAATCAA
-217 3.8 TTCAAAATCAATATTTA
-136 4.4 ATCATAATCTTTATCAT
Lawsonia intracellularis PHE/MN1-00 LI0650 -270 4.4 TTGAATTTGAAATGCTT
Position: -313
Score: 4.1
Sequence: GTTATGTTGATATTCAT
Position: -307
Score: 4.5
Sequence: TTGATATTCATTACGAT
Position: -235
Score: 4
Sequence: TTGACGTTTATATTCGT
Position: -105
Score: 3.7
Sequence: ATGATAGTAATCTTTAA
Locus tag: LI0660
LI0660 -313 4.1 GTTATGTTGATATTCAT
-307 4.5 TTGATATTCATTACGAT
-235 4 TTGACGTTTATATTCGT
-105 3.7 ATGATAGTAATCTTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfr
Ortholog function: Bacterioferritin
Desulfovibrio desulfuricans G20 Dde_0133 -120 3.7 CTGACTTTCGTCATCAC
34 3.6 ATGTCATTGAAGTTCTG
Lawsonia intracellularis PHE/MN1-00 LI0660 -313 4.1 GTTATGTTGATATTCAT
-307 4.5 TTGATATTCATTACGAT
-235 4 TTGACGTTTATATTCGT
-105 3.7 ATGATAGTAATCTTTAA
Position: 10
Score: 5.1
Sequence: TTGAAATTCAATCTCAG
Locus tag: LIA012
LIA012 10 5.1 TTGAAATTCAATCTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Desal_0644
Ortholog function: Methyltransferase type 11
Lawsonia intracellularis PHE/MN1-00 LIA012 4 4.3 AGAATATTGAAATTCAA
10 5.1 TTGAAATTCAATCTCAG
40 4.4 ATGAATATATTATTCAT
Lawsonia intracellularis PHE/MN1-00 LIA011 4 4.3 AGAATATTGAAATTCAA
10 5.1 TTGAAATTCAATCTCAG
40 4.4 ATGAATATATTATTCAT