Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpoH regulog to Lawsonia intracellularis PHE/MN1-00

Reference regulog properties
Source regulog: RpoH - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma70
Regulation mode:
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Lawsonia intracellularis PHE/MN1-00
Orthologous TF(s) LI0613
Regulated genes 6
Built upon 20 sites [see more]
Predicted regulatory interactions in Lawsonia intracellularis PHE/MN1-00
Locus tag Position Score Sequence
Position: 3
Score: 5.9
Sequence: GATGATA-(16)-CCCTAT
Locus tag: LI0794
LI0794 3 5.9 GATGATA-(16)-CCCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpP
Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC
Desulfovibrio desulfuricans G20 Dde_2220 -81 6.6 CTTGAAC-(12)-CCCGAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0691 -159 5.4 CCCGAAA-(11)-GCCGAT
Desulfovibrio magneticus RS-1 DMR_28170 -135 5.9 CCTGAAG-(12)-CCGGAT
-77 5.2 CCGGAAG-(11)-CCCGAT
Desulfohalobium retbaense DSM 5692 Dret_0511 -186 4.8 CTGGAAA-(14)-ACTGAT