Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpoN regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_0427
Regulated genes 103
Built upon 487 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -183
Score: 4.9
Sequence: CTTGGCGCGGAATTTGCTT
Locus tag: DvMF_0177
DvMF_0177 -183 4.9 CTTGGCGCGGAATTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mltC
Ortholog function: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)
Desulfovibrio vulgaris str. Miyazaki F DvMF_0177 -183 4.9 CTTGGCGCGGAATTTGCTT
Position: -90
Score: 4.2
Sequence: GTTGGCACGAGGTTTTCAT
Error

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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