Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PspF regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: PspF - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Phage shock response
Effector: PspA regulatory protein
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_1798
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -171
Score: 5.3
Sequence: TTTGGTGATTTTCACCAGA
Locus tag: DvMF_1799
DvMF_1799 -171 5.3 TTTGGTGATTTTCACCAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pspA
Ortholog function: phage shock protein A
Desulfovibrio vulgaris Hildenborough DVU2988 -147 4.8 TTTGGTGGATTTTACCAGT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1799 -171 5.3 TTTGGTGATTTTCACCAGA
Desulfovibrio desulfuricans G20 Dde_3226 -171 5.2 CATGGTTTTTTATGCCATA
-151 5 TATGGTTTAAATTGCTACT
-131 5.2 AATGGTTTTGTATACCACA
Desulfovibrio magneticus RS-1 DMR_38330 -169 5.1 CATGGCGATTTTCTCCAGT
-148 5.1 TGTGGCGAAAAATACCAGT
Desulfomicrobium baculatum DSM 4028 Dbac_1225 -180 4.9 TGTGGTTTCCATCACCAAT