Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU0539/DVU0946 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DVU0539/DVU0946 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2601, DvMF_2095, DvMF_1360
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -164
Score: 5.3
Sequence: TGCAAACTTCAGTTTGCG
Locus tag: DvMF_1363
DvMF_1363 -164 5.3 TGCAAACTTCAGTTTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0943
Ortholog function: Uncharacterized membrane protein family UPF0324
Desulfohalobium retbaense DSM 5692 Dret_1220 -401 4.5 TGCTAAGCGCGATTGGCA
-292 4.7 TGCAATCCCGGCTTAGCA
-268 5.2 TGCCAACCGCGGTTGGCA
-32 4.4 AGCAAAGACACGTATGCA
Desulfomicrobium baculatum DSM 4028 Dbac_2656 -182 5.7 TGCAAACTCGTGTTTGCA
-163 4.1 TGTAAACGCGACATTGCA
Desulfovibrio desulfuricans G20 Dde_0876 -215 4.8 TGGTAACTTTGGTTTGCA
Desulfovibrio salexigens DSM 2638 Desal_0416 -189 5 TGCAAACTTTGCTTTGCA
-155 3.8 TGCAAGCCCAAGTAATCA
Desulfovibrio vulgaris Hildenborough DVU0943 -196 5 CGCAAACGCGGGTTTGCG
-172 4.5 CGCTAACACAGGTTTACG
-153 5.2 TGCAAAGTGATGTTTGCA
Desulfovibrio vulgaris Hildenborough DVU2133 -195 4.8 TGCAAATAAAAGTTTGCA
-172 5.2 TGCAATGTCAGGTTTGCA
-153 5.3 TGCAAATTGAAGTTTGCA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1363 -209 4.5 TGCATACCCGCGGAGGCA
-164 5.3 TGCAAACTTCAGTTTGCG
Position: -238
Score: 4.4
Sequence: TGCCTTTTCGAGTTGGCA
Locus tag: DvMF_2092
DvMF_2092 -238 4.4 TGCCTTTTCGAGTTGGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0943
Ortholog function: Uncharacterized membrane protein family UPF0324
Desulfohalobium retbaense DSM 5692 Dret_0966 -399 5 TGTAAACGCGAGTTGGCA
Desulfovibrio magneticus RS-1 DMR_25930 -212 4.5 TGACAACTCCAGTTTACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2092 -238 4.4 TGCCTTTTCGAGTTGGCA
Position: -175
Score: 4.8
Sequence: TGCTAACTCGCGGCAGCA
Locus tag: DvMF_2602
DvMF_2602 -175 4.8 TGCTAACTCGCGGCAGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0540
Ortholog function: integral membrane sensor signal transduction histidine kinase
Desulfovibrio vulgaris str. Miyazaki F DvMF_2602 -175 4.8 TGCTAACTCGCGGCAGCA