Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU0621 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DVU0621 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Nitrate and nitrite respiration
Effector: Nitrite
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_1492, DvMF_1493
Regulated genes 1
Built upon 17 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -277
Score: 6.1
Sequence: GTCAGATTTTTCTGTC
Locus tag: DvMF_1491
DvMF_1491 -277 6.1 GTCAGATTTTTCTGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrfH
Ortholog function: Cytochrome c nitrite reductase, small subunit NrfH
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0082 -315 5.7 GTCATAATTTTCTGAA
-295 5.5 GTCATGTTTATCTGAA
Desulfovibrio piger ATCC 29098 DESPIG_01831 -250 5.8 GTCAGATTTTTCGGAA
-229 5.6 GTCTTTTTTTTCTGAA
Desulfovibrio vulgaris Hildenborough DVU0624 -322 6 GTCATCTTTTTCTGTC
-302 6.2 GTCATCTTTTTCTGAC
Desulfovibrio vulgaris str. Miyazaki F DvMF_1491 -277 6.1 GTCAGATTTTTCTGTC