Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU3305 regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: DVU3305 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2109
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -224
Score: 5.7
Sequence: CGTTGCATTTCGCAACG
Position: -146
Score: 5.7
Sequence: CGTTGCACTTTGCAACA
Locus tag: DvMF_2106
DvMF_2106 -224 5.7 CGTTGCATTTCGCAACG
-146 5.7 CGTTGCACTTTGCAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3302
Ortholog function: hypothetical protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2106 -224 5.7 CGTTGCATTTCGCAACG
-146 5.7 CGTTGCACTTTGCAACA
Position: -154
Score: 5.7
Sequence: TGTTGCAAAGTGCAACG
Position: -76
Score: 5.7
Sequence: CGTTGCGAAATGCAACG
Locus tag: DvMF_2107
DvMF_2107 -154 5.7 TGTTGCAAAGTGCAACG
-76 5.7 CGTTGCGAAATGCAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3303
Ortholog function: ATP-dependent protease, response regulator receiver protein
Desulfomicrobium baculatum DSM 4028 Dbac_2668 -134 5.4 TGTTGCAGATTGCAGCG
-58 5.9 TGTTGCAAAACGCAACA
Desulfovibrio magneticus RS-1 DMR_10810 -148 5.7 CGTTGCGAAACGCAACA
-103 5.7 CGTTGCTTATTGCAACA
Desulfovibrio vulgaris Hildenborough DVU3303 -90 5.9 TGTTGCGATATGCAACA
-9 5.7 TGCTGCATAATGCAACA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2107 -154 5.7 TGTTGCAAAGTGCAACG
-76 5.7 CGTTGCGAAATGCAACG