Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HcpR regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: HcpR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_0993
Regulated genes 3
Built upon 25 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -75
Score: 4.7
Sequence: TTGTGACCTGCGTCACTG
Locus tag: DvMF_0885
DvMF_0885 -75 4.7 TTGTGACCTGCGTCACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1080
Ortholog function: nitrite and sulphite reductase 4Fe-4S region
Desulfovibrio vulgaris Hildenborough DVU1080 -234 4.4 GTGTGACCCGCGTCACAG
Desulfovibrio desulfuricans G20 Dde_2390 -80 4.5 ATGTGACCTGCATCACAG
Desulfovibrio salexigens DSM 2638 Desal_2852 -77 4 AAATGACTTAAGTCAGGG
Desulfovibrio magneticus RS-1 DMR_35330 -93 5.3 GCTTGACGTAAGTCAAGG
Desulfomicrobium baculatum DSM 4028 Dbac_1379 -52 6.1 TTTTGACCTAGGTCAAGG
Position: -211
Score: 4.7
Sequence: TTTTGATGTCCGTCACAT
Locus tag: DvMF_0988
DvMF_0988 -211 4.7 TTTTGATGTCCGTCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Desulfovibrio vulgaris Hildenborough DVU2543 -184 4.8 ATTTGACGCACGTCACAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0988 -211 4.7 TTTTGATGTCCGTCACAT
Desulfovibrio desulfuricans G20 Dde_2641 -153 4.6 TTGTGACTCCGGTCACAT
Desulfovibrio salexigens DSM 2638 Desal_2849 -238 5.1 CCTTGACCTGAATCAAAT
-88 5.2 TTTTGATCTGAATCAAAT
Desulfovibrio magneticus RS-1 DMR_35370 -94 5.8 TTTTGACTTAGGTCAAAC
Desulfomicrobium baculatum DSM 4028 Dbac_0596 -94 5.6 TTTTGATCTGCGTCAAAG
Desulfomicrobium baculatum DSM 4028 Dbac_2941 -82 5.5 TTTTGATCCAGCTCAAAG
Desulfohalobium retbaense DSM 5692 Dret_2386 -121 6 TTTTGACTCAGGTCAAAG
Position: -122
Score: 4.4
Sequence: ATGTGACCCCGATCACGG
Locus tag: DvMF_2445
DvMF_2445 -122 4.4 ATGTGACCCCGATCACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dbac_1921
Ortholog function: HPP family protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2445 -122 4.4 ATGTGACCCCGATCACGG
Desulfovibrio magneticus RS-1 DMR_12600 -64 5 ATTTGACTTAGGTCATGT
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