Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FliA regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: FliA - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma70
Regulation mode:
Biological process: Motility
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2011
Regulated genes 10
Built upon 64 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -81
Score: 7.4
Sequence: TAAAGCAA-(11)-GCCGATGA
Locus tag: DvMF_0893
DvMF_0893 -81 7.4 TAAAGCAA-(11)-GCCGATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0993
Ortholog function: hypothetical protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_0893 -81 7.4 TAAAGCAA-(11)-GCCGATGA
Desulfovibrio desulfuricans G20 Dde_2399 -89 7.2 TAAAGTAA-(12)-GCCGAAAC
Position: -67
Score: 8.2
Sequence: TAAAGTTT-(11)-GCCGATGA
Locus tag: DvMF_1334
DvMF_1334 -67 8.2 TAAAGTTT-(11)-GCCGATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0976
Ortholog function: response regulator receiver protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_1334 -67 8.2 TAAAGTTT-(11)-GCCGATGA
Desulfovibrio desulfuricans G20 Dde_2384 -90 7.5 TAAAGCCG-(11)-GCCGATAT
Position: -112
Score: 7
Sequence: TATAGTTT-(11)-GCCGAAAA
Locus tag: DvMF_2950
DvMF_2950 -112 7 TATAGTTT-(11)-GCCGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flaD
Ortholog function: flagellin, putative
Desulfovibrio vulgaris str. Miyazaki F DvMF_2950 -112 7 TATAGTTT-(11)-GCCGAAAA