Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhoB regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: PhoB - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_0882
Regulated genes 9
Built upon 95 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -185
Score: 4
Sequence: GTGACACACGTCCGCCAC
Locus tag: DvMF_0944
DvMF_0944 -185 4 GTGACACACGTCCGCCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_0944
Ortholog function: protein of unknown function DUF6 transmembrane
Desulfovibrio vulgaris str. Miyazaki F DvMF_0944 -185 4 GTGACACACGTCCGCCAC
Position: -156
Score: 5.2
Sequence: GCGTCACACCGCCGTCAC
Position: -145
Score: 4.5
Sequence: CCGTCACCACATCCTCAC
Locus tag: DvMF_1040
DvMF_1040 -156 5.2 GCGTCACACCGCCGTCAC
-145 4.5 CCGTCACCACATCCTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_1040
Ortholog function: PhoH family protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_1040 -176 3.8 CCGCCACCGGGCCGCAAC
-156 5.2 GCGTCACACCGCCGTCAC
Desulfovibrio desulfuricans G20 Dde_1059 -124 4.5 GCTTCATCAAGCTGTAAC
Position: -122
Score: 5.1
Sequence: GCGACACAGGATTGTAAC
Locus tag: DvMF_2565
DvMF_2565 -122 5.1 GCGACACAGGATTGTAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2565
Ortholog function: periplasmic phosphate binding protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2565 -122 5.1 GCGACACAGGATTGTAAC
Desulfomicrobium baculatum DSM 4028 Dbac_2679 -113 5.6 TTGTCACACCTCTGTCAC
-91 4.1 GCCTCAACATCCTGTAAC
Desulfohalobium retbaense DSM 5692 Dret_0464 -267 4.2 TTGTTACCGCAATGTTAC
-96 5 TTGTCGCAGGATTGTCAC