Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TmcR regulog to Desulfovibrio vulgaris str. Miyazaki F

Reference regulog properties
Source regulog: TmcR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode:
Biological process: Energy metabolism
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris str. Miyazaki F
Orthologous TF(s) DvMF_2546, DvMF_2547
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris str. Miyazaki F
Locus tag Position Score Sequence
Position: -170
Score: 6.1
Sequence: AAATCTACCACGCAAGTAGACTA
Locus tag: DvMF_2557
DvMF_2557 -170 6.1 AAATCTACCACGCAAGTAGACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tmcD
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_3707 -217 6.1 TTCTATACCAAACAGGTATAGTA
-149 5.3 TACTCCACCACTACAGTATAGTT
-83 5.8 ATGTCTACCCAAAAGATAGAGTT
Desulfovibrio vulgaris Hildenborough DVU0266 -182 5.9 TTGTCTACCATGACAGTAGTATT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2557 -195 5.7 AACTATACCATTGCAGTATACAA
-170 6.1 AAATCTACCACGCAAGTAGACTA