Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HcpR regulog to Desulfohalobium retbaense DSM 5692

Reference regulog properties
Source regulog: HcpR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode:
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfohalobium retbaense DSM 5692
Orthologous TF(s) Dret_1279
Regulated genes 3
Built upon 25 sites [see more]
Predicted regulatory interactions in Desulfohalobium retbaense DSM 5692
Locus tag Position Score Sequence
Position: -105
Score: 5.7
Sequence: TTTTGATGCAGGTCAAAG
Locus tag: Dret_2382
Dret_2382 -105 5.7 TTTTGATGCAGGTCAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_2303
Ortholog function: Cupin 2 conserved barrel domain protein
Desulfovibrio magneticus RS-1 DMR_35390 -94 5.8 TTTTGACTTAGGTCAAAC
Desulfohalobium retbaense DSM 5692 Dret_2382 -105 5.7 TTTTGATGCAGGTCAAAG
Position: -121
Score: 6
Sequence: TTTTGACTCAGGTCAAAG
Locus tag: Dret_2386
Dret_2386 -121 6 TTTTGACTCAGGTCAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Desulfovibrio vulgaris Hildenborough DVU2543 -184 4.8 ATTTGACGCACGTCACAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_0988 -211 4.7 TTTTGATGTCCGTCACAT
Desulfovibrio desulfuricans G20 Dde_2641 -153 4.6 TTGTGACTCCGGTCACAT
Desulfovibrio salexigens DSM 2638 Desal_2849 -238 5.1 CCTTGACCTGAATCAAAT
-88 5.2 TTTTGATCTGAATCAAAT
Desulfovibrio magneticus RS-1 DMR_35370 -94 5.8 TTTTGACTTAGGTCAAAC
Desulfomicrobium baculatum DSM 4028 Dbac_0596 -94 5.6 TTTTGATCTGCGTCAAAG
Desulfomicrobium baculatum DSM 4028 Dbac_2941 -82 5.5 TTTTGATCCAGCTCAAAG
Desulfohalobium retbaense DSM 5692 Dret_2386 -121 6 TTTTGACTCAGGTCAAAG