Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PhoB regulog to Desulfohalobium retbaense DSM 5692

Reference regulog properties
Source regulog: PhoB - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Phosphate metabolism
Effector: Inorganic phosphate
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfohalobium retbaense DSM 5692
Orthologous TF(s) Dret_0467
Regulated genes 4
Built upon 95 sites [see more]
Predicted regulatory interactions in Desulfohalobium retbaense DSM 5692
Locus tag Position Score Sequence
Position: -96
Score: 5
Sequence: TTGTCGCAGGATTGTCAC
Locus tag: Dret_0464
Dret_0464 -96 5 TTGTCGCAGGATTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2565
Ortholog function: periplasmic phosphate binding protein
Desulfovibrio vulgaris str. Miyazaki F DvMF_2565 -122 5.1 GCGACACAGGATTGTAAC
Desulfomicrobium baculatum DSM 4028 Dbac_2679 -113 5.6 TTGTCACACCTCTGTCAC
-91 4.1 GCCTCAACATCCTGTAAC
Desulfohalobium retbaense DSM 5692 Dret_0464 -267 4.2 TTGTTACCGCAATGTTAC
-96 5 TTGTCGCAGGATTGTCAC
Position: -147
Score: 4.4
Sequence: TTGTCACACGATTGTATA
Locus tag: Dret_1361
Dret_1361 -147 4.4 TTGTCACACGATTGTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0169
Ortholog function: oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein
Desulfovibrio desulfuricans G20 Dde_0275 -19 3.9 ATGTTACAAAAATGTCAT
Desulfohalobium retbaense DSM 5692 Dret_1361 -147 4.4 TTGTCACACGATTGTATA
Position: -102
Score: 3.9
Sequence: GCGCCATGCCTGTGTCAC
Locus tag: Dret_2292
Dret_2292 -102 3.9 GCGCCATGCCTGTGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dde_1216
Ortholog function: Alkaline phosphatase (EC 3.1.3.1)
Desulfovibrio desulfuricans G20 Dde_1216 -95 5.1 CTGTCATTCTGTTGTCAC
Desulfovibrio salexigens DSM 2638 Desal_1742 -232 4.3 TTGTCACTAATTTGTATT
Desulfovibrio magneticus RS-1 DMR_08520 -65 4.2 ACGCCACGGGTTCGTCAC
Desulfohalobium retbaense DSM 5692 Dret_2292 -102 3.9 GCGCCATGCCTGTGTCAC