Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpoN regulog to Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Reference regulog properties
Source regulog: RpoN - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Sigma54
Regulation mode:
Biological process: Zinc homeostasis; Nitrogen metabolism; Motility; Metabolite transport; Intercellular adhesion; Cell wall metabolism
Effector:
Phylum: Proteobacteria
Propagated regulon:
Target genome Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Orthologous TF(s) Ddes_0974
Regulated genes 58
Built upon 487 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Locus tag Position Score Sequence
Position: -191
Score: 4.2
Sequence: ACTGGTACGTTTCTTGAAA
Locus tag: Ddes_0082
Ddes_0082 -191 4.2 ACTGGTACGTTTCTTGAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrfH
Ortholog function: Cytochrome c nitrite reductase, small subunit NrfH
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0082 -191 4.2 ACTGGTACGTTTCTTGAAA
Desulfovibrio piger ATCC 29098 DESPIG_01831 -119 5.4 ACTGGCACGCCCCTTGCTC
Desulfovibrio vulgaris Hildenborough DVU0624 -196 4.7 TTCGGCACGCCTTTTGTAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1491 -146 4.1 AACGGCACGGGTCTTGAAG
Position: -244
Score: 4.8
Sequence: TTTGGAACAATGTTTGCTA
Locus tag: Ddes_0154
Ddes_0154 -244 4.8 TTTGGAACAATGTTTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0154
Ortholog function: sodium-solute symporter, putative
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0154 -244 4.8 TTTGGAACAATGTTTGCTA
Position: -134
Score: 4.3
Sequence: AGTTGCATGATTTTTGCAA
Locus tag: Ddes_0185
Ddes_0185 -134 4.3 AGTTGCATGATTTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zraP
Ortholog function: Zinc resistance-associated protein
Desulfomicrobium baculatum DSM 4028 Dbac_1014 -63 4.8 TCTGGCACGGCACTTGATA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0185 -134 4.3 AGTTGCATGATTTTTGCAA
Desulfovibrio piger ATCC 29098 DESPIG_02787 -128 4.4 GCTTGCATGTTTTTTGCAA
Position: -73
Score: 3.3
Sequence: AACGGCAGAAGCGTTGCCG
Position: -27
Score: 3.4
Sequence: ATTTGCAAAAATCATGCAA
Locus tag: Ddes_0186
Ddes_0186 -73 3.3 AACGGCAGAAGCGTTGCCG
-27 3.4 ATTTGCAAAAATCATGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: zraS
Ortholog function: Sensor protein of sigma-54-dependent two-component system
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0186 -27 3.4 ATTTGCAAAAATCATGCAA
Position: -29
Score: 4.7
Sequence: TTTGGCAACCATTTTGCAA
Locus tag: Ddes_0193
Ddes_0193 -29 4.7 TTTGGCAACCATTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliR
Ortholog function: Flagellar biosynthesis protein FliR
Desulfohalobium retbaense DSM 5692 Dret_0586 -51 4.5 GCTGGCATAATTTATGCTA
Desulfomicrobium baculatum DSM 4028 Dbac_3473 -30 4.7 TCTGGTCCGCGTTTTGCTG
Desulfovibrio desulfuricans G20 Dde_0378 -30 4.6 GATGGTCTGTTTTTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0193 -29 4.7 TTTGGCAACCATTTTGCAA
Desulfovibrio magneticus RS-1 DMR_23860 -29 4.6 CTTGGTCCAGCTTTTGCTA
Desulfovibrio salexigens DSM 2638 Desal_2592 -41 3.4 ATGGGTCCTGATTTTGCAG
Desulfovibrio vulgaris Hildenborough DVU3234 -29 4.8 CGTGGCCCGTATTTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2016 -29 5.1 CATGGCCCGCATCTTGCTG
Position: -190
Score: 4.6
Sequence: TCTGGAACACTTCTTGTAT
Locus tag: Ddes_0220
Ddes_0220 -190 4.6 TCTGGAACACTTCTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0220
Ortholog function: Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15)
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0220 -190 4.6 TCTGGAACACTTCTTGTAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1934 -119 3.8 GCAGGCTCATATTTTGCTA
Position: -162
Score: 3.9
Sequence: TCTGGCGCAATGCCTGCCG
Position: -61
Score: 4.8
Sequence: CTTGGCACTGTACTTGCTG
Locus tag: Ddes_0311
Ddes_0311 -162 3.9 TCTGGCGCAATGCCTGCCG
-61 4.8 CTTGGCACTGTACTTGCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3387
Ortholog function: hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_1772 -70 4.4 GCTGGCCCGAAATCTGCTA
Desulfovibrio desulfuricans G20 Dde_0108 -57 4.2 ATCGGCACTATGGTTGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0311 -61 4.8 CTTGGCACTGTACTTGCTG
Desulfovibrio magneticus RS-1 DMR_05460 -13 4.1 GTCGGCACAAGGGTTGCAA
Desulfovibrio salexigens DSM 2638 Desal_2614 -59 4.3 GTTGGTACGTTTGCTGCAA
Desulfovibrio vulgaris Hildenborough DVU3387 -92 4.1 GCAGGTGCGGTTCTTGCTA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2067 -67 5 GCTGGCATTCCCCTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0507 -62 3.9 TAAGGCCTAAAATTTGCAT
Position: -75
Score: 4.9
Sequence: AATGGCATACAGTTTGCTT
Locus tag: Ddes_0313
Ddes_0313 -75 4.9 AATGGCATACAGTTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0410
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0313 -75 4.9 AATGGCATACAGTTTGCTT
Desulfovibrio magneticus RS-1 DMR_25590 -78 4.9 TTTGGCACGGTTGTTGTAA
Desulfovibrio salexigens DSM 2638 Desal_2827 -81 4.8 GTTGGCATGACTCTTGTAT
Desulfovibrio vulgaris Hildenborough DVU0410 -70 5.1 GTTGGCCCGGAATTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1546 -75 4.8 CATGGTCCGTTTCTTGCTT
Position: -96
Score: 4.5
Sequence: CTTGGCCCCTAATTTGCAT
Locus tag: Ddes_0327
Ddes_0327 -96 4.5 CTTGGCCCCTAATTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flhF
Ortholog function: Flagellar biosynthesis protein FlhF
Desulfohalobium retbaense DSM 5692 Dret_0589 -92 4.2 GACGGAACGGTATTTGCCC
Desulfomicrobium baculatum DSM 4028 Dbac_3470 -95 4.8 CCTGGCCCGTTTTTTGCCA
Desulfovibrio desulfuricans G20 Dde_0381 -145 4.8 GCTGGCACGGGCCTTGTAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0327 -96 4.5 CTTGGCCCCTAATTTGCAT
Desulfovibrio magneticus RS-1 DMR_23890 -156 4.7 CTTGGCACAGGCCTTGTAT
Desulfovibrio salexigens DSM 2638 Desal_2595 -107 5 GATGGTACGCTTCTTGCCT
Desulfovibrio vulgaris Hildenborough DVU3231 -199 4.8 GCTGGCACGGGCCTTGTAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2013 -177 4.6 GCTGGCACAGGCTTTGTAT
Position: -79
Score: 4.5
Sequence: CCGGGTACGCTTCTTGCTA
Locus tag: Ddes_0332
Ddes_0332 -79 4.5 CCGGGTACGCTTCTTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flhB
Ortholog function: Flagellar biosynthesis protein FlhB
Desulfohalobium retbaense DSM 5692 Dret_0587 -51 4.5 GCTGGCATAATTTATGCTA
Desulfomicrobium baculatum DSM 4028 Dbac_3472 -30 4.7 TCTGGTCCGCGTTTTGCTG
Desulfovibrio desulfuricans G20 Dde_0379 -30 4.6 GATGGTCTGTTTTTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0332 -79 4.5 CCGGGTACGCTTCTTGCTA
Desulfovibrio magneticus RS-1 DMR_23870 -29 4.6 CTTGGTCCAGCTTTTGCTA
Desulfovibrio salexigens DSM 2638 Desal_2593 -41 3.4 ATGGGTCCTGATTTTGCAG
Desulfovibrio vulgaris Hildenborough DVU3233 -29 4.8 CGTGGCCCGTATTTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2015 -29 5.1 CATGGCCCGCATCTTGCTG
Position: -141
Score: 4.7
Sequence: TCTGGCACAGTGTCTGCAA
Locus tag: Ddes_0373
Ddes_0373 -141 4.7 TCTGGCACAGTGTCTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliL
Ortholog function: Flagellar basal body-associated protein FliL
Desulfohalobium retbaense DSM 5692 Dret_0580 -51 4.5 GCTGGCATAATTTATGCTA
Desulfovibrio desulfuricans G20 Dde_3586 -85 4 CGTGGCGCGCTGCTTGACT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0373 -141 4.7 TCTGGCACAGTGTCTGCAA
Position: -71
Score: 4.4
Sequence: TCTGGCATCAATCTTGAAT
Locus tag: Ddes_0378
Ddes_0378 -71 4.4 TCTGGCATCAATCTTGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliQ
Ortholog function: Flagellar biosynthesis protein FliQ
Desulfovibrio desulfuricans G20 Dde_3582 -85 4 CGTGGCGCGCTGCTTGACT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0378 -71 4.4 TCTGGCATCAATCTTGAAT
Position: -101
Score: 5.3
Sequence: TTTGGCCCGCACTTTGCAT
Locus tag: Ddes_0391
Ddes_0391 -101 5.3 TTTGGCCCGCACTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgF
Ortholog function: Flagellar basal-body rod protein FlgF
Desulfohalobium retbaense DSM 5692 Dret_0593 -92 4.2 GACGGAACGGTATTTGCCC
Desulfomicrobium baculatum DSM 4028 Dbac_2410 -46 4.8 ACTGGCCTGGTATTTGCTC
Desulfovibrio desulfuricans G20 Dde_3159 -66 4.9 GCTGGCCCGCATGTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0391 -101 5.3 TTTGGCCCGCACTTTGCAT
Desulfovibrio magneticus RS-1 DMR_31570 -46 4.8 GCTGGCCCGCATGTTGCAA
Desulfovibrio salexigens DSM 2638 Desal_1008 -71 5 TTTGGCCTGCACTTTGCAA
Desulfovibrio vulgaris Hildenborough DVU0512 -68 4.1 CGTGGTCTGCATATTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2517 -58 4.5 TGTGGCCCATGCCTTGCAA
Lawsonia intracellularis PHE/MN1-00 LI0740 -147 4.6 CTTGGTATAACTTTTGCTA
Position: -82
Score: 4.5
Sequence: AGTTGCACGCATTTTGCAA
Locus tag: Ddes_0530
Ddes_0530 -82 4.5 AGTTGCACGCATTTTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliD
Ortholog function: Flagellar hook-associated protein FliD
Desulfomicrobium baculatum DSM 4028 Dbac_2386 -64 4.7 TCTGGCACCAGGTTTGCTC
Desulfovibrio desulfuricans G20 Dde_1120 -70 4.7 CATGGCATTTTCCTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0530 -82 4.5 AGTTGCACGCATTTTGCAA
Desulfovibrio magneticus RS-1 DMR_03980 -71 4.9 GTTGGCATCCGCCTTGCTC
Desulfovibrio salexigens DSM 2638 Desal_1249 -67 4.9 TTTGGCATCCTGATTGCAT
Desulfovibrio vulgaris Hildenborough DVU0863 -71 4.2 CGTGGCATCTGGATTGCAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2912 -73 4.7 TCTGGCACCAGCCTTGCAG
Position: -177
Score: 4.9
Sequence: TTTGGCACGTTTCTGGCAT
Position: -148
Score: 4.3
Sequence: AATGGCACACACTGTGCCG
Locus tag: Ddes_0596
Ddes_0596 -177 4.9 TTTGGCACGTTTCTGGCAT
-148 4.3 AATGGCACACACTGTGCCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0858
Ortholog function: lipoprotein, putative
Desulfomicrobium baculatum DSM 4028 Dbac_0245 -46 4.6 CTTGGTATCTATCTTGCTT
Desulfovibrio desulfuricans G20 Dde_2573 -132 4.2 CATGGCCCTTCTTTTGCCG
-65 4.3 CACGGCACTCAATTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0596 -177 4.9 TTTGGCACGTTTCTGGCAT
-148 4.3 AATGGCACACACTGTGCCG
-54 4 GTTGGCAAGGTGAATGCCA
Desulfovibrio salexigens DSM 2638 Desal_1243 -38 4.6 TACGGCACAAATATTGCTT
Desulfovibrio vulgaris Hildenborough DVU0858 -79 5 TCCGGCATCGTTCTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2906 -127 4.7 TACGGCACCATTCTTGCTG
Position: -76
Score: 4.9
Sequence: TTTGGCAAGACCTTTGCAT
Locus tag: Ddes_0695
Ddes_0695 -76 4.9 TTTGGCAAGACCTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU3020
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_3230 -95 4.4 AATGGCAGAACCTTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0695 -76 4.9 TTTGGCAAGACCTTTGCAT
Desulfovibrio magneticus RS-1 DMR_25570 -89 5 CTTGGCAGGCTCTTTGCTA
Desulfovibrio vulgaris Hildenborough DVU3020 -56 5.1 CATGGCATGTGCCTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1856 -71 4.7 CTCGGCAAGGCTCTTGCAT
Lawsonia intracellularis PHE/MN1-00 LI0277 -57 4.4 TTAGGCATAGTTTTTGATT
Position: -63
Score: 5
Sequence: CTTGGCCCGCTGTTTGCAC
Locus tag: Ddes_0698
Ddes_0698 -63 5 CTTGGCCCGCTGTTTGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliJ
Ortholog function: Flagellar biosynthesis chaperone FliJ
Desulfohalobium retbaense DSM 5692 Dret_0573 -290 4.5 ATTGGAGCACTTTTTGCTC
-130 4.7 TATGGCGTGGTATTTGCAT
Desulfomicrobium baculatum DSM 4028 Dbac_2249 -29 4.5 TTGTGCACGCTTTTTGCTA
Desulfovibrio desulfuricans G20 Dde_2705 -112 5.1 TCTGGCCTGATCTTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0698 -119 3.9 CGTGGCATGGTGGCTGCGC
-63 5 CTTGGCCCGCTGTTTGCAC
Desulfovibrio magneticus RS-1 DMR_42100 -58 4.7 ACTGGCCCGTGTCTTGCAA
Desulfovibrio vulgaris Hildenborough DVU0913 -72 4.6 AACGGCCCGTTCCTTGCTA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1393 -93 4.8 TTCGGCCCGGTATTTGCTA
Lawsonia intracellularis PHE/MN1-00 LI1060 -73 4.3 TTAGGAATATTTTTTGCAT
Position: -76
Score: 4.1
Sequence: TGCGGCCCGGCGCGTGCTG
Locus tag: Ddes_0750
Ddes_0750 -76 4.1 TGCGGCCCGGCGCGTGCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nudF
Ortholog function: ADP-ribose pyrophosphatase (EC 3.6.1.13)
Desulfovibrio desulfuricans G20 Dde_2287 -243 4.9 AATGGCACGCTTGATGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0750 -76 4.1 TGCGGCCCGGCGCGTGCTG
Desulfovibrio piger ATCC 29098 DESPIG_01518 8 3.6 TGCGGCCGGCATGCTGCTG
Desulfovibrio salexigens DSM 2638 Desal_2793 -380 5 TTTGGCATACCCATTGCTA
Position: -59
Score: 4.6
Sequence: CTTGGCAGCATTTTTGCAT
Locus tag: Ddes_0763
Ddes_0763 -59 4.6 CTTGGCAGCATTTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1032
Ortholog function: hypothetical protein
Desulfomicrobium baculatum DSM 4028 Dbac_2476 -47 5 CTTGGCAGGGACTTTGCTT
Desulfovibrio desulfuricans G20 Dde_1455 -54 4.7 GTTGGCAGACTTATTGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0763 -59 4.6 CTTGGCAGCATTTTTGCAT
Desulfovibrio magneticus RS-1 DMR_39260 -52 5.1 TCTGGCAGGTTTTTTGCTT
Desulfovibrio salexigens DSM 2638 Desal_0181 -54 5 TTTGGCAAGGTCATTGCAT
Desulfovibrio vulgaris Hildenborough DVU1032 -52 4.8 GGTGGCGTGCTTCTTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_0905 -38 5.1 CATGGCAGGGTTCTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0887 -53 5.3 CTTGGCAAGCTTTTTGCTT
Position: -110
Score: 5.1
Sequence: ATTGGCACGACCTTTGCCT
Locus tag: Ddes_0767
Ddes_0767 -110 5.1 ATTGGCACGACCTTTGCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_0825
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0767 -110 5.1 ATTGGCACGACCTTTGCCT
Position: -58
Score: 4.6
Sequence: TTTGGCACATGGATTGCAA
Locus tag: Ddes_1028
Ddes_1028 -58 4.6 TTTGGCACATGGATTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliC
Ortholog function: flagellin domain protein
Desulfomicrobium baculatum DSM 4028 Dbac_2385 -64 3.8 CAAGGCCCGCAAACTGCTC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1028 -58 4.6 TTTGGCACATGGATTGCAA
Desulfovibrio magneticus RS-1 DMR_10270 -161 3.8 TTAGGTATGTAAATTGCTA
Position: -126
Score: 4.7
Sequence: CTTGGCACAGATAGTGCTT
Locus tag: Ddes_1147
Ddes_1147 -126 4.7 CTTGGCACAGATAGTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: amt
Ortholog function: Ammonium transporter
Desulfohalobium retbaense DSM 5692 Dret_2267 -53 5.1 TTTGGCACCTCTCTTGCCT
Desulfomicrobium baculatum DSM 4028 Dbac_3048 -45 5.2 TATGGCACCGTCCTTGCTC
Desulfovibrio desulfuricans G20 Dde_2311 -75 5.2 TCTGGCCTGCTGCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1147 -126 4.7 CTTGGCACAGATAGTGCTT
Desulfovibrio piger ATCC 29098 DESPIG_00642 -127 5.1 TATGGCACAGGGCTTGCTT
Desulfovibrio salexigens DSM 2638 Desal_3438 -145 4.8 TTTGGCACAATGCGTGCTT
Desulfovibrio vulgaris Hildenborough DVU1231 -81 5 GTTGGCACGCGACTTGCCT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0866 -98 5.3 GATGGCACGCTCCTTGCCT
Position: -120
Score: 5.3
Sequence: TCTGGCATCCATCTTGCTT
Locus tag: Ddes_1230
Ddes_1230 -120 5.3 TCTGGCATCCATCTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1854
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_1940 -79 5.1 TCTGGCATCCATTTTGCTA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1230 -120 5.3 TCTGGCATCCATCTTGCTT
Desulfovibrio magneticus RS-1 DMR_05510 -54 4.5 CCGGGCATCGTCCTTGCAT
Desulfovibrio vulgaris Hildenborough DVU1854 34 5 TTAGGCACGCATATTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0386 -69 5.1 GCTGGCACCGATCTTGCTC
Position: -43
Score: 4.6
Sequence: TTTGGAACACTCTTTGTAT
Locus tag: Ddes_1259
Ddes_1259 -43 4.6 TTTGGAACACTCTTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliK
Ortholog function: Flagellar hook-length control protein FliK
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1259 -43 4.6 TTTGGAACACTCTTTGTAT
Desulfovibrio vulgaris Hildenborough DVU1445 -82 3.9 TATGGCGCGGGAAATGCAA
-43 4.5 ATTGGAACACTCCTTGTAT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0248 -44 4.7 TTTGGAACGGTCCTTGTAA
Lawsonia intracellularis PHE/MN1-00 LI0568 -44 4.5 TTTGGAACACTCCTTGTAC
Position: -123
Score: 4.7
Sequence: TGTGGCATGCCCCATGCAA
Locus tag: Ddes_1436
Ddes_1436 -123 4.7 TGTGGCATGCCCCATGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2824
Ortholog function: Pyruvate formate-lyase (EC 2.3.1.54)
Desulfomicrobium baculatum DSM 4028 Dbac_1587 -156 4.3 ATTGGCACAGAGAATGCTC
Desulfovibrio desulfuricans G20 Dde_1273 -187 4.4 ATTGGAACACGCCTTGCCG
-84 4.7 TTTGGCACATTACCTGCTC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1436 -123 4.7 TGTGGCATGCCCCATGCAA
Desulfovibrio piger ATCC 29098 DESPIG_02849 -80 4.8 AATGGCACAGGCATTGCTA
Desulfovibrio vulgaris Hildenborough DVU2824 -91 5.1 TTTGGCACGTTCCCTGCTC
Position: -228
Score: 5.1
Sequence: TCTGGCACGCATCCTGCAA
Locus tag: Ddes_1437
Ddes_1437 -228 5.1 TCTGGCACGCATCCTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2820
Ortholog function: amidohydrolase family protein
Desulfomicrobium baculatum DSM 4028 Dbac_1590 -109 4.9 GATGGCATGCATTCTGCTC
Desulfovibrio desulfuricans G20 Dde_1278 -54 4.5 CAAGGCACGCTTTTTGCGA
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1437 -228 5.1 TCTGGCACGCATCCTGCAA
Desulfovibrio vulgaris Hildenborough DVU2820 -58 4.8 CTGGGCATGGTTCTTGCCT
Position: -66
Score: 4.4
Sequence: TATGGACCATATTTTGCAT
Locus tag: Ddes_1559
Ddes_1559 -66 4.4 TATGGACCATATTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU1880
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_1654 -87 4.8 GGTGGCATGCTTTATGCTC
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1559 -66 4.4 TATGGACCATATTTTGCAT
Desulfovibrio vulgaris Hildenborough DVU1880 -68 5 ATTGGCATGATTCATGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_0574 -68 4.4 GCTGGCATGGGCGATGCAT
Lawsonia intracellularis PHE/MN1-00 LI0899 -60 3.5 AATAGTATGAATATTGCAT
Position: -79
Score: 4.5
Sequence: TTAGGCATGAATGTTGCTA
Locus tag: Ddes_1573
Ddes_1573 -79 4.5 TTAGGCATGAATGTTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliF
Ortholog function: Flagellar M-ring protein FliF
Desulfohalobium retbaense DSM 5692 Dret_0569 -290 4.5 ATTGGAGCACTTTTTGCTC
-130 4.7 TATGGCGTGGTATTTGCAT
Desulfomicrobium baculatum DSM 4028 Dbac_3029 -91 4.7 TCTGGAATGGTCATTGCAA
Desulfovibrio desulfuricans G20 Dde_0353 -75 4.9 CATGGAACACACCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1573 -79 4.5 TTAGGCATGAATGTTGCTA
Desulfovibrio magneticus RS-1 DMR_45050 -82 4.9 GCTGGAACGCTTTTTGCCC
Desulfovibrio salexigens DSM 2638 Desal_1153 -50 4.8 AATGGCCCACCATTTGCTT
Desulfovibrio vulgaris Hildenborough DVU0313 -91 4.9 CGTGGAACCCTTTTTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0857 -68 5 TATGGCATATGTTTTGCTT
Position: -59
Score: 4.8
Sequence: TTTGGAACAAATGTTGCTT
Locus tag: Ddes_1576
Ddes_1576 -59 4.8 TTTGGAACAAATGTTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgB
Ortholog function: Flagellar basal-body rod protein FlgB
Desulfohalobium retbaense DSM 5692 Dret_0653 -159 3.5 TAGGGCTCAGGTGTTGCCT
Desulfomicrobium baculatum DSM 4028 Dbac_3026 -91 4.7 TCTGGAATGGTCATTGCAA
Desulfovibrio desulfuricans G20 Dde_0356 -75 4.9 CATGGAACACACCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1576 -59 4.8 TTTGGAACAAATGTTGCTT
Desulfovibrio magneticus RS-1 DMR_45020 -82 4.9 GCTGGAACGCTTTTTGCCC
Desulfovibrio salexigens DSM 2638 Desal_1156 -96 4.9 AATGGAACACCTTTTGCTA
Desulfovibrio vulgaris Hildenborough DVU0316 -91 4.9 CGTGGAACCCTTTTTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2284 -106 4.8 GCTGGAACACCTCTTGCTG
Lawsonia intracellularis PHE/MN1-00 LI0860 -68 5 TATGGCATATGTTTTGCTT
Position: -115
Score: 4.9
Sequence: AATGGCATGGCGATTGCTA
Locus tag: Ddes_1642
Ddes_1642 -115 4.9 AATGGCATGGCGATTGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0150
Ortholog function: hypothetical membrane protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1642 -115 4.9 AATGGCATGGCGATTGCTA
Desulfovibrio magneticus RS-1 DMR_42230 -78 5 GCCGGCACACCCCTTGCTT
Desulfovibrio piger ATCC 29098 DESPIG_02990 -105 5.3 ATTGGCACGGGTGTTGCTT
Desulfovibrio vulgaris Hildenborough DVU0150 -180 5.3 TTTGGCACGGCCATTGCTC
Desulfovibrio vulgaris str. Miyazaki F DvMF_2341 -197 5.2 TTTGGCATGCGGCTTGCTA
Position: -78
Score: 4.4
Sequence: AATGGCCTTTTTCTTGCAT
Locus tag: Ddes_1836
Ddes_1836 -78 4.4 AATGGCCTTTTTCTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fliM
Ortholog function: Flagellar motor switch protein FliM
Desulfohalobium retbaense DSM 5692 Dret_0581 -51 4.5 GCTGGCATAATTTATGCTA
Desulfovibrio desulfuricans G20 Dde_2708 -136 4.1 AATGGCATTTATTATGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1836 -78 4.4 AATGGCCTTTTTCTTGCAT
Desulfovibrio magneticus RS-1 DMR_22580 -60 4.2 GTTGGCATGACAATTGATA
Desulfovibrio piger ATCC 29098 DESPIG_02462 -51 4.8 TTTGGCCTTGTTCTTGCAT
Desulfovibrio vulgaris Hildenborough DVU0910 -128 4.5 ACTGGCCCCTATCTTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_1396 -237 4.4 CTTGGCGTTCATCTTGCAT
Position: -6
Score: 4.6
Sequence: GGCGGCATGCGTATTGCTT
Locus tag: Ddes_1866
Ddes_1866 -6 4.6 GGCGGCATGCGTATTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2104
Ortholog function: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Desulfovibrio desulfuricans G20 Dde_3200 -49 4.2 GTCGGCATCATTCCTGCCT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1866 -118 3.8 GCAGGGACGCTTTTTGTAT
Desulfovibrio magneticus RS-1 DMR_11250 -42 4.9 TTCGGCACGGTTCCTGCCT
Desulfovibrio salexigens DSM 2638 Desal_2514 -57 4.8 CAAGGCACGGCTGTTGCTT
Desulfovibrio vulgaris Hildenborough DVU2104 -60 4.4 CGTGGAACGGAACGTGCTT
Position: -118
Score: 3.8
Sequence: GCAGGGACGCTTTTTGTAT
Position: -102
Score: 3.6
Sequence: TATTGCACCGGCCGTGATT
Locus tag: Ddes_1867
Ddes_1867 -118 3.8 GCAGGGACGCTTTTTGTAT
-102 3.6 TATTGCACCGGCCGTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2108
Ortholog function: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1867 -118 3.8 GCAGGGACGCTTTTTGTAT
Desulfovibrio magneticus RS-1 DMR_11260 -42 4.9 TTCGGCACGGTTCCTGCCT
Position: -84
Score: 4.4
Sequence: CGAGGCACGGAAATTGCTT
Locus tag: Ddes_2002
Ddes_2002 -84 4.4 CGAGGCACGGAAATTGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0518
Ortholog function: FlgN family protein
Desulfomicrobium baculatum DSM 4028 Dbac_2404 -106 4 ACTGGTCGGGATTTTGCAA
Desulfovibrio desulfuricans G20 Dde_3153 -164 4.1 GCTGGCAGGAAAATTGCTG
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2002 -84 4.4 CGAGGCACGGAAATTGCTT
Desulfovibrio magneticus RS-1 DMR_31510 -71 4.7 ACTGGCCCGCAATTTGCCT
Desulfovibrio salexigens DSM 2638 Desal_1015 -104 4.5 ATTGGCAAGAAACTTGCTG
Desulfovibrio vulgaris Hildenborough DVU0518 -68 4.1 CGTGGTCTGCATATTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2523 -220 4.4 ACTGGCACGGTGTTGGCAA
-150 3.8 TGCGGAATGCTTGTTTCTT
Lawsonia intracellularis PHE/MN1-00 LI0746 -62 3.8 TTTGGTATAAAAGCTGCAT
Position: -57
Score: 4.9
Sequence: TTCGGCACGCTTTCTGCAA
Locus tag: Ddes_2004
Ddes_2004 -57 4.9 TTCGGCACGCTTTCTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgI
Ortholog function: Flagellar P-ring protein FlgI
Desulfohalobium retbaense DSM 5692 Dret_0597 -92 4.2 GACGGAACGGTATTTGCCC
Desulfomicrobium baculatum DSM 4028 Dbac_2406 -46 4.8 ACTGGCCTGGTATTTGCTC
Desulfovibrio desulfuricans G20 Dde_3155 -66 4.9 GCTGGCCCGCATGTTGCAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2004 -57 4.9 TTCGGCACGCTTTCTGCAA
Desulfovibrio magneticus RS-1 DMR_31530 -46 4.8 GCTGGCCCGCATGTTGCAA
Desulfovibrio salexigens DSM 2638 Desal_1012 -71 5 TTTGGCCTGCACTTTGCAA
Desulfovibrio vulgaris Hildenborough DVU0516 -68 4.1 CGTGGTCTGCATATTGCAA
Desulfovibrio vulgaris str. Miyazaki F DvMF_2521 -220 4.4 ACTGGCACGGTGTTGGCAA
-150 3.8 TGCGGAATGCTTGTTTCTT
Lawsonia intracellularis PHE/MN1-00 LI0744 -147 4.6 CTTGGTATAACTTTTGCTA
Position: -173
Score: 4.1
Sequence: AATGGCAGCAAATTTGCAT
Locus tag: Ddes_2079
Ddes_2079 -173 4.1 AATGGCAGCAAATTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mltC
Ortholog function: Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-)
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2079 -173 4.1 AATGGCAGCAAATTTGCAT
Desulfovibrio vulgaris Hildenborough DVU1536 -90 5 ACTGGCCCGGATGTTGCTT
Position: -76
Score: 5.3
Sequence: TCTGGCACGCTCTCTGCAT
Locus tag: Ddes_2091
Ddes_2091 -76 5.3 TCTGGCACGCTCTCTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flgE
Ortholog function: Flagellar hook protein FlgE
Desulfomicrobium baculatum DSM 4028 Dbac_1614 -84 4.1 CATGGACCCATTCCTGCAT
Desulfovibrio desulfuricans G20 Dde_0298 -86 5.3 TCTGGCACGGTCCATGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2091 -76 5.3 TCTGGCACGCTCTCTGCAT
Desulfovibrio salexigens DSM 2638 Desal_2938 -115 5.2 TTAGGCACGCCCCTTGCTT
Desulfovibrio vulgaris Hildenborough DVU0307 -59 5.3 TCTGGCACGGCTCGTGCTT
Desulfovibrio vulgaris str. Miyazaki F DvMF_1808 -128 5.2 GCTGGCACGGCTCGTGCTT
Lawsonia intracellularis PHE/MN1-00 LI0348 -77 5.2 CTTGGCATGGCTTCTGCTT
Position: -243
Score: 4.8
Sequence: AATGGCATGATTCCTGCTG
Locus tag: Ddes_2282
Ddes_2282 -243 4.8 AATGGCATGATTCCTGCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: flaB3
Ortholog function: Flagellin protein FlaA
Desulfovibrio desulfuricans G20 Dde_1501 -136 5.2 TCTGGCACGATTTATGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2282 -243 4.8 AATGGCATGATTCCTGCTG
Position: -63
Score: 4.7
Sequence: TTTGGCACGACTACTGCAG
Locus tag: Ddes_2342
Ddes_2342 -63 4.7 TTTGGCACGACTACTGCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_2342
Ortholog function: choline/carnitine/betaine transporter
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2342 -63 4.7 TTTGGCACGACTACTGCAG
Desulfovibrio salexigens DSM 2638 Desal_3549 -184 5.2 TTTGGCCCGCTTATTGCTC
Position: -81
Score: 4.6
Sequence: GTTGGCATACTTATTGATT
Locus tag: Ddes_2343
Ddes_2343 -81 4.6 GTTGGCATACTTATTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_2343
Ortholog function: type I phosphodiesterase/nucleotide pyrophosphatase
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2343 -81 4.6 GTTGGCATACTTATTGATT
Desulfovibrio salexigens DSM 2638 Desal_3548 -184 5.2 TTTGGCCCGCTTATTGCTC
Position: -151
Score: 4.7
Sequence: GTTGGCCTGCCTATTGCAC
Locus tag: Ddes_2345
Ddes_2345 -151 4.7 GTTGGCCTGCCTATTGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_2345
Ortholog function: sigma54 specific transcriptional regulator, Fis family
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2345 -151 4.7 GTTGGCCTGCCTATTGCAC
Desulfovibrio salexigens DSM 2638 Desal_3540 -184 5.2 TTTGGCCCGCTTATTGCTC
Position: -62
Score: 4.3
Sequence: TCTGGCATCATTAGTGCAA
Locus tag: Ddes_2346
Ddes_2346 -62 4.3 TCTGGCATCATTAGTGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_2346
Ortholog function: OsmC family protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2346 -62 4.3 TCTGGCATCATTAGTGCAA
Desulfovibrio salexigens DSM 2638 Desal_3028 -67 3.9 ATTGGCACGAATAGAGCTT
Desulfovibrio salexigens DSM 2638 Desal_3544 -184 5.2 TTTGGCCCGCTTATTGCTC
Position: -198
Score: 5.3
Sequence: TTTGGCACGCACATTGCTC
Locus tag: Ddes_2374
Ddes_2374 -198 5.3 TTTGGCACGCACATTGCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dbac_2155
Ortholog function: Hydrolase, UxaA family
Desulfomicrobium baculatum DSM 4028 Dbac_2155 -282 5.3 TTTGGAATGCTCCTTGCTT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_2374 -198 5.3 TTTGGCACGCACATTGCTC
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