Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Reference regulog properties
Source regulog: Fur - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Orthologous TF(s) Ddes_0603
Regulated genes 16
Built upon 193 sites [see more]
Predicted regulatory interactions in Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774
Locus tag Position Score Sequence
Position: -198
Score: 4.2
Sequence: TTGAAATTGAATGTTCT
Locus tag: Ddes_0430
Ddes_0430 -198 4.2 TTGAAATTGAATGTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0430
Ortholog function: Transcriptional regulator, AraC family
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0430 -198 4.2 TTGAAATTGAATGTTCT
-192 3.8 TTGAATGTTCTTTTCAG
Position: -51
Score: 5.9
Sequence: TTGAAATTGATTTTCAA
Locus tag: Ddes_0477
Ddes_0477 -51 5.9 TTGAAATTGATTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0477
Ortholog function: dihydrodipicolinate reductase
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0477 -51 5.9 TTGAAATTGATTTTCAA
-45 4.5 TTGATTTTCAATCTAAA
Position: -34
Score: 4.7
Sequence: AAGACTTTGAAATTCAA
Position: -28
Score: 5.2
Sequence: TTGAAATTCAAATTCTA
Locus tag: Ddes_0648
Ddes_0648 -34 4.7 AAGACTTTGAAATTCAA
-28 5.2 TTGAAATTCAAATTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_0648
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_0648 -34 4.7 AAGACTTTGAAATTCAA
-28 5.2 TTGAAATTCAAATTCTA
Desulfovibrio salexigens DSM 2638 Desal_0114 -164 4.6 ATGAAAACGAATGTCAA
-52 4.9 TTGATTTCGAAATTCAT
Desulfovibrio magneticus RS-1 DMR_16670 12 4.5 ATGAAAATGCTTTTCGT
Position: -84
Score: 4.9
Sequence: TTGAAAAAGAATTTCAA
Locus tag: Ddes_1247
Ddes_1247 -84 4.9 TTGAAAAAGAATTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_1247
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1247 -84 4.9 TTGAAAAAGAATTTCAA
Desulfovibrio piger ATCC 29098 DESPIG_00020 -63 4.7 TTGACATCAATTTTCAA
Position: -73
Score: 5.7
Sequence: TTGACATTGAATTTCAA
Position: -67
Score: 5.8
Sequence: TTGAATTTCAATTTCAT
Locus tag: Ddes_1652
Ddes_1652 -73 5.7 TTGACATTGAATTTCAA
-67 5.8 TTGAATTTCAATTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Ddes_1652
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1652 -73 5.7 TTGACATTGAATTTCAA
-67 5.8 TTGAATTTCAATTTCAT
Desulfovibrio piger ATCC 29098 DESPIG_02510 -6 5.1 TTGAAAATGAAATTCTT
0 4.8 ATGAAATTCTTTTTCTA
Position: -80
Score: 5.4
Sequence: ATGACATTGACTTTCAT
Position: -74
Score: 5.4
Sequence: TTGACTTTCATTTTCAC
Locus tag: Ddes_1729
Ddes_1729 -80 5.4 ATGACATTGACTTTCAT
-74 5.4 TTGACTTTCATTTTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DvMF_2569
Ortholog function: ATPase associated with various cellular activities AAA_3
Desulfovibrio desulfuricans G20 Dde_0483 -100 4.9 CTGAAATTGGTTTTCAA
-94 4.6 TTGGTTTTCAATATCAG
-31 4.9 TTGAAAATGAAATTTAT
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 Ddes_1729 -80 5.4 ATGACATTGACTTTCAT
-74 5.4 TTGACTTTCATTTTCAC
Desulfovibrio piger ATCC 29098 DESPIG_01861 -38 5.5 TTGAAAATGAAATTCAA
-32 4.7 ATGAAATTCAATTTATT
Desulfovibrio salexigens DSM 2638 Desal_2558 -77 4.5 TCGAAAATCGTTTTCAA
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