Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU2106 regulog to Desulfovibrio vulgaris Hildenborough

Reference regulog properties
Source regulog: DVU2106 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Nitrogen fixation
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris Hildenborough
Orthologous TF(s) DVU2106
Regulated genes 2
Built upon 9 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris Hildenborough
Locus tag Position Score Sequence
Position: -137
Score: 6
Sequence: GGGCGCATTTTGCGCCC
Locus tag: DVU2105
DVU2105 -137 6 GGGCGCATTTTGCGCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU2105
Ortholog function: Major ampullate spidroin
Desulfovibrio vulgaris Hildenborough DVU2105 -137 6 GGGCGCATTTTGCGCCC
Position: -160
Score: 5.7
Sequence: GGGCGTGTTTTGCGCCC
Position: -129
Score: 5.8
Sequence: AGGCGCATTTTACGCCC
Locus tag: null
null -160 5.7 GGGCGTGTTTTGCGCCC
-129 5.8 AGGCGCATTTTACGCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Dret_0446
Ortholog function: hypothetical protein
Desulfohalobium retbaense DSM 5692 Dret_0446 -146 5.1 AGACAAATAATTCGCCC
Desulfovibrio desulfuricans G20 Dde_3197 -150 5.6 GGGCGTATTATACGCCA
-128 5.5 GGGCGCGTTTCACGCCC
Desulfovibrio magneticus RS-1 DMR_11290 -130 5.6 GGGCTAATTATTCGCCC
Desulfovibrio salexigens DSM 2638 Desal_0622 -141 5.4 GGACGCATAATTAGCCC
Desulfovibrio vulgaris Hildenborough null -160 5.7 GGGCGTGTTTTGCGCCC
-129 5.8 AGGCGCATTTTACGCCC