Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of DVU0309 regulog to Desulfovibrio vulgaris Hildenborough

Reference regulog properties
Source regulog: DVU0309 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process:
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris Hildenborough
Orthologous TF(s) DVU0309
Regulated genes 2
Built upon 14 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris Hildenborough
Locus tag Position Score Sequence
Position: -85
Score: 5.7
Sequence: TCCATCTGTTTTTCAGATAGA
Locus tag: DVU0308
DVU0308 -85 5.7 TCCATCTGTTTTTCAGATAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: COG4125
Ortholog function: membrane protein, putative
Desulfovibrio desulfuricans G20 Dde_0348 -246 5.7 TCTATCACAAAATTAGATAGA
-213 4.4 ACCCTCACTCAATGTGATAGT
Desulfovibrio vulgaris Hildenborough DVU0308 -85 5.7 TCCATCTGTTTTTCAGATAGA
-52 5.1 TCAATCCGTCTTCCAGATAGA
Position: -61
Score: 5.1
Sequence: TCTATCTGGAAGACGGATTGA
Position: -28
Score: 5.7
Sequence: TCTATCTGAAAAACAGATGGA
Locus tag: DVU0309
DVU0309 -61 5.1 TCTATCTGGAAGACGGATTGA
-28 5.7 TCTATCTGAAAAACAGATGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: DVU0309
Ortholog function: transcriptional regulator, LysR family
Desulfohalobium retbaense DSM 5692 Dret_0355 -418 5.3 GCTATCAAAATTTCTGATAGG
Desulfovibrio desulfuricans G20 Dde_0349 -67 4.4 ACTATCACATTGAGTGAGGGT
-34 5.7 TCTATCTAATTTTGTGATAGA
Desulfovibrio salexigens DSM 2638 Desal_3366 -63 5 TCAATCTTTTATTCAGTTTGG
-31 5.2 ACAATCTTAAAACAAGATAGG
Desulfovibrio vulgaris Hildenborough DVU0309 -61 5.1 TCTATCTGGAAGACGGATTGA
-28 5.7 TCTATCTGAAAAACAGATGGA