Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of TmcR regulog to Desulfovibrio vulgaris Hildenborough

Reference regulog properties
Source regulog: TmcR - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode:
Biological process: Energy metabolism
Effector:
Phylum: Proteobacteria/delta
Propagated regulon:
Target genome Desulfovibrio vulgaris Hildenborough
Orthologous TF(s) DVU0269
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Desulfovibrio vulgaris Hildenborough
Locus tag Position Score Sequence
Position: -152
Score: 5.9
Sequence: TTGTCTACCATGACAGTAGTATT
Locus tag: DVU0266
DVU0266 -152 5.9 TTGTCTACCATGACAGTAGTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tmcD
Ortholog function: hypothetical protein
Desulfovibrio desulfuricans G20 Dde_3707 -217 6.1 TTCTATACCAAACAGGTATAGTA
-149 5.3 TACTCCACCACTACAGTATAGTT
-83 5.8 ATGTCTACCCAAAAGATAGAGTT
Desulfovibrio vulgaris Hildenborough DVU0266 -182 5.9 TTGTCTACCATGACAGTAGTATT
Desulfovibrio vulgaris str. Miyazaki F DvMF_2557 -195 5.7 AACTATACCATTGCAGTATACAA
-170 6.1 AAATCTACCACGCAAGTAGACTA