Propagation of CelR regulog to Thermotoga sp. RQ2
| Source regulog: | CelR - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Cellobiose utilization |
| Effector: | Cellobiose |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermotoga sp. RQ2 |
| Orthologous TF(s) | TRQ2_1600 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -58
Score: 5.8 Sequence: ATGAAAACATTTTCAA
Locus tag: TRQ2_0619
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| TRQ2_0619 | -58 | 5.8 | ATGAAAACATTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: TM0312 | ||||
| Ortholog function: Predicted dehydrogenase in CelR regulon, COG0673 | ||||
| Thermotoga maritima MSB8 | TM0312 | -49 | 5.9 | ATGAAAACATTTTCAG |
| Thermotoga sp. RQ2 | TRQ2_0619 | -58 | 5.8 | ATGAAAACATTTTCAA |
| Thermotoga neapolitana DSM 4359 | CTN_0375 | -49 | 5.8 | ATGAAAACATTTTCAA |
| Thermotoga petrophila RKU-1 | Tpet_0605 | -58 | 5.8 | ATGAAAACATTTTCAA |
| Thermotoga naphthophila RKU-10 | Tnap_0951 | -58 | 5.8 | ATGAAAACATTTTCAA |
|
Position: -48
Score: 5.6 Sequence: GTGAAAACAGTTTCAT
Locus tag: TRQ2_0623
|
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| TRQ2_0623 | -48 | 5.6 | GTGAAAACAGTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: celQ | ||||
| Ortholog function: Putative alpha-glucosidase (EC 3.2.1.-) | ||||
| Thermotoga maritima MSB8 | TM0308 | -48 | 5.6 | GTGAAAACAGTTTCAT |
| Thermotoga sp. RQ2 | TRQ2_0623 | -48 | 5.6 | GTGAAAACAGTTTCAT |
| Thermotoga neapolitana DSM 4359 | CTN_0380 | 4 | 6.2 | ATGAAAACATTTTCAT |
| Thermotoga petrophila RKU-1 | Tpet_0609 | -48 | 5.6 | GTGAAAACAGTTTCAT |
| Thermotoga naphthophila RKU-10 | Tnap_0947 | -48 | 5.6 | GTGAAAACAGTTTCAT |
|
Position: -74
Score: 6.2 Sequence: ATGAAAATGTTTTCAT
Locus tag: TRQ2_0631
|
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| TRQ2_0631 | -74 | 6.2 | ATGAAAATGTTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gloE | ||||
| Ortholog function: Glucose oligosaccharide ABC transport system, sugar-binding protein | ||||
| Thermotoga maritima MSB8 | TM0300 | -74 | 6.2 | ATGAAAATGTTTTCAT |
| Thermotoga sp. RQ2 | TRQ2_0631 | -74 | 6.2 | ATGAAAATGTTTTCAT |
|
Position: -179
Score: 6.2 Sequence: ATGAAAACATTTTCAT
Locus tag: TRQ2_0632
|
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| TRQ2_0632 | -179 | 6.2 | ATGAAAACATTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gloR | ||||
| Ortholog function: Predicted glucose oligosaccharide utilization regulator, LacI family | ||||
| Thermotoga maritima MSB8 | TM0299 | -179 | 6.2 | ATGAAAACATTTTCAT |
| Thermotoga sp. RQ2 | TRQ2_0632 | -179 | 6.2 | ATGAAAACATTTTCAT |
|
Position: -59
Score: 5.9 Sequence: ATGAAAACATTTTCAG
Locus tag: TRQ2_0968
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| TRQ2_0968 | -59 | 5.9 | ATGAAAACATTTTCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cbpA | ||||
| Ortholog function: Cellobiose phosphorylase (EC 2.4.1.-) | ||||
| Thermotoga maritima MSB8 | TM1848 | -59 | 5.9 | ATGAAAACATTTTCAG |
| Thermotoga sp. RQ2 | TRQ2_0968 | -59 | 5.9 | ATGAAAACATTTTCAG |
| Thermotoga neapolitana DSM 4359 | CTN_0783 | -57 | 6 | ATGAAAACATTTTCAC |
| Thermotoga petrophila RKU-1 | Tpet_0951 | -59 | 5.9 | ATGAAAACATTTTCAG |
| Thermotoga naphthophila RKU-10 | Tnap_0603 | -59 | 5.9 | ATGAAAACATTTTCAG |
|
Position: -41
Score: 5.9 Sequence: ATGTAAACATTTTCAT
Locus tag: TRQ2_1187
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| TRQ2_1187 | -41 | 5.9 | ATGTAAACATTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cel12A | ||||
| Ortholog function: cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4) | ||||
| Thermotoga maritima MSB8 | TM1524 | -41 | 5.9 | ATGTAAACATTTTCAT |
| Thermotoga sp. RQ2 | TRQ2_1187 | -41 | 5.9 | ATGTAAACATTTTCAT |
| Thermotoga neapolitana DSM 4359 | CTN_1106 | 60 | 5.9 | ATGtAAAcATTTTCAT |
| Thermotoga petrophila RKU-1 | Tpet_1268 | 170 | 5.9 | ATGtAAAcATTTTCAT |
| Thermotoga naphthophila RKU-10 | Tnap_1285 | 119 | 5.9 | ATGtAAAcATTTTCAT |
|
Position: -70
Score: 5.7 Sequence: ATGTAAACATTTTCAC
Locus tag: TRQ2_1595
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| TRQ2_1595 | -70 | 5.7 | ATGTAAACATTTTCAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: celE | ||||
| Ortholog function: Predicted cellobiose ABC transport system, sugar-binding protein | ||||
| Thermotoga maritima MSB8 | TM1223 | -70 | 5.7 | ATGTAAACATTTTCAC |
| Thermotoga sp. RQ2 | TRQ2_1595 | -70 | 5.7 | ATGTAAACATTTTCAC |
| Thermotoga neapolitana DSM 4359 | CTN_1348 | -70 | 5.7 | ATGTAAACATTTTCAC |
| Thermotoga petrophila RKU-1 | Tpet_1545 | -70 | 5.7 | ATGTAAACATTTTCAC |
| Thermotoga naphthophila RKU-10 | Tnap_1569 | -70 | 5.7 | ATGTAAACATTTTCAC |
| Thermotoga lettingae TMO | Tlet_1438 | -74 | 6.2 | ATGAAAATGTTTTCAT |