Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HcpR regulog to Thermotoga sp. RQ2

Reference regulog properties
Source regulog: HcpR - Thermotogales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga sp. RQ2
Orthologous TF(s) TRQ2_1644
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Thermotoga sp. RQ2
Locus tag Position Score Sequence
Position: -80
Score: 6.7
Locus tag: TRQ2_1643
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Thermotoga maritima MSB8 TM1172 -87 6.5 CCCGTAACAATTGTTACAGA
Thermotoga sp. RQ2 TRQ2_1643 -80 6.7 CCCGTAACAATTGTTACGGA
Thermotoga neapolitana DSM 4359 CTN_1403 -50 6.7 CCCGTAACAATTGTTACGGA
Thermotoga lettingae TMO Tlet_0222 -79 5.7 TTCGTAACAAAAGTTACTGT
Thermosipho africanus TCF52B THA_824 -79 6.1 TTCGTAACCTATGTTACAGA
Fervidobacterium nodosum Rt17-B1 Fnod_1302 -92 6.5 TCCGTAACATAGGTTACGGA
Position: -31
Score: 6.7
Locus tag: TRQ2_1644
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcpR
Ortholog function: Transcriptional regulator HcpR, Crp/Fnr family
Thermotoga maritima MSB8 TM1171 -28 6.5 TCTGTAACAATTGTTACGGG
Thermotoga sp. RQ2 TRQ2_1644 -31 6.7 TCCGTAACAATTGTTACGGG
Thermotoga petrophila RKU-1 Tpet_1578 -28 6.3 TCTGTAACAATTGTTACGAG
Thermotoga naphthophila RKU-10 Tnap_1598 -28 6.3 TCTGTAACAATTGTTACGAG
Thermotoga lettingae TMO Tlet_1357 -20 5.6 GCGGTAACATATGATACAGA
Fervidobacterium nodosum Rt17-B1 Fnod_1303 -229 6.5 TCCGTAACCTATGTTACGGA
Petrotoga mobilis SJ95 Pmob_1162 -52 6.2 TCAGTAACAAATGTTACGCA
Thermotogales bacterium TBF 19.5.1 Kole_1156 -28 6.6 TCGGTAACATATGTTACGGA