Propagation of UxaR regulog to Thermotoga maritima MSB8
| Source regulog: | UxaR - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Galacturonate utilization; Pectin utilization |
| Effector: | |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermotoga maritima MSB8 |
| Orthologous TF(s) | TM0439 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -23
Score: 6 Sequence: TTAAATATCACATATCA
Locus tag: TM0066
|
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| TM0066 | -23 | 6 | TTAAATATCACATATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: kdgA | ||||
| Ortholog function: 2-dehydro-3-deoxyphosphogluconate aldolase | ||||
| Thermotoga maritima MSB8 | TM0066 | -23 | 6 | TTAAATATCACATATCA |
| Thermotoga sp. RQ2 | TRQ2_0881 | -29 | 6.2 | TTAAACATCACATATCA |
| Thermotoga neapolitana DSM 4359 | CTN_0627 | -384 | 6.2 | TTAAACATCAAATATCA |
| Thermotoga petrophila RKU-1 | Tpet_0858 | -29 | 6.2 | TTAAACATCACATATCA |
| Thermotoga naphthophila RKU-10 | Tnap_0696 | -29 | 6.2 | TTAAACATCACATATCA |
|
Position: -50
Score: 5.4 Sequence: TGAAGTATCAGACATCA
Locus tag: TM0432
|
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| TM0432 | -50 | 5.4 | TGAAGTATCAGACATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aguE | ||||
| Ortholog function: Alpha-1,4-digalacturonate ABC transporter, substrate binding protein | ||||
| Thermotoga maritima MSB8 | TM0432 | -50 | 5.4 | TGAAGTATCAGACATCA |
| Thermotoga sp. RQ2 | TRQ2_0512 | -50 | 5.4 | TGAAGTATCAGACATCA |
|
Position: -29
Score: 6.4 Sequence: TGAAACATCAGATATCT
Locus tag: TM0433
|
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| TM0433 | -29 | 6.4 | TGAAACATCAGATATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pelA | ||||
| Ortholog function: Pectate lyase precursor (EC 4.2.2.2) | ||||
| Thermotoga maritima MSB8 | TM0433 | -29 | 6.4 | TGAAACATCAGATATCT |
| Thermotoga sp. RQ2 | TRQ2_0511 | -35 | 6.4 | TGAAACATCAGATATCT |
|
Position: -25
Score: 6.4 Sequence: TGAAACATCAAACATCT
Locus tag: TM0436
|
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| TM0436 | -25 | 6.4 | TGAAACATCAAACATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldH | ||||
| Ortholog function: alcohol dehydrogenase, zinc-containing | ||||
| Thermotoga maritima MSB8 | TM0436 | -25 | 6.4 | TGAAACATCAAACATCT |
| Thermotoga sp. RQ2 | TRQ2_0499 | -29 | 6.4 | TGAAACATCAAACATCT |
| Thermotoga petrophila RKU-1 | Tpet_0484 | -28 | 6.4 | TGAAACATCAAACATCT |