Propagation of NrdR regulog to Thermotoga maritima MSB8
| Source regulog: | NrdR - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermotoga maritima MSB8 |
| Orthologous TF(s) | TM1707 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -34
Score: 5.3 Sequence: ACACAATATGTTGTTT
Locus tag: TM0118
|
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| TM0118 | -34 | 5.3 | ACACAATATGTTGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrdJ | ||||
| Ortholog function: B12-dependent ribonucleotide reductase (EC 1.17.4.1) | ||||
| Thermotoga maritima MSB8 | TM0118 | -64 | 4.5 | CTACCACATGTTGAAT |
| -34 | 5.3 | ACACAATATGTTGTTT | ||
| Thermotoga sp. RQ2 | TRQ2_0829 | -64 | 4.3 | CTACCAAATGTTGAAT |
| -34 | 5 | ACACAATATGTTGTTA | ||
| Thermotoga neapolitana DSM 4359 | CTN_0571 | -37 | 4.4 | CCACCACATGTTGAAT |
| -7 | 5 | AcACAATATgTTGTta | ||
| Thermotoga petrophila RKU-1 | Tpet_0806 | -64 | 4.3 | CTACCAAATGTTGAAT |
| -34 | 5 | ACACAATATGTTGTTA | ||
| Thermotoga naphthophila RKU-10 | Tnap_0748 | -64 | 4.3 | CTACCAAATGTTGAAT |
| -34 | 5 | ACACAATATGTTGTTA | ||
| Thermotoga lettingae TMO | Tlet_0333 | -75 | 5.4 | ACACAATATATAGTGT |
| -45 | 4.7 | ATACAACTTGTAGTAT | ||
| Thermosipho africanus TCF52B | THA_675 | -91 | 5.3 | AAACTATATATTGTAT |
| -59 | 5.5 | ATACAATATATTGTGG | ||
| Thermosipho melanesiensis BI429 | Tmel_0606 | -103 | 5.4 | ACACAATATATAGTAT |
| -71 | 5.5 | ATACAATATATTGTGG | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_0421 | -128 | 4.5 | TAACTATAAGTTGTGT |
| -98 | 5.1 | ATACTATATATGGTAT | ||
| Petrotoga mobilis SJ95 | Pmob_1872 | -63 | 4.6 | TTTCAATATATTGTCG |
| -32 | 4.9 | GTACAATATATTGATT | ||
|
Position: -140
Score: 5.3 Sequence: ATACAATATATGGTAT
Locus tag: TM0152
|
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| TM0152 | -140 | 5.3 | ATACAATATATGGTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: TM0152 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Thermotoga maritima MSB8 | TM0152 | -140 | 5.3 | ATACAATATATGGTAT |
| -109 | 3.8 | ATACTACAAAATGTAC | ||
| Thermotoga sp. RQ2 | TRQ2_0796 | -140 | 4.6 | ATACAATATACGGTAT |
| -109 | 4.2 | ATACTACAAAATGTAT | ||
| Thermotoga neapolitana DSM 4359 | CTN_0535 | -141 | 4.2 | CTACTTCATGTTGTGT |
| -110 | 4.5 | ATACCATAAGTAGTGT | ||
| Thermotoga petrophila RKU-1 | Tpet_0773 | -140 | 4.6 | ATACAATATACGGTAT |
| -109 | 3.8 | ATACTACAAAATGTAC | ||
| Thermotoga naphthophila RKU-10 | Tnap_0782 | -140 | 4.6 | ATACAATATACGGTAT |
| -109 | 3.8 | ATACTACAAAATGTAC | ||
| Thermotogales bacterium TBF 19.5.1 | Kole_0584 | -154 | 4.5 | TTTCTATATGTTGTGA |
| -126 | 4.1 | CTCCAATACATTGTGT | ||
|
Position: -55
Score: 5.3 Sequence: CCACAATATATTGTGG
Locus tag: TM0384
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| TM0384 | -55 | 5.3 | CCACAATATATTGTGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrdG | ||||
| Ortholog function: Anaerobic ribonucleoside-triphosphate reductase-activating protein | ||||
| Thermotoga maritima MSB8 | TM0384 | -85 | 4.1 | CAACAATTTTTTGAGA |
| -55 | 5.3 | CCACAATATATTGTGG | ||
| Thermotoga sp. RQ2 | TRQ2_0549 | -85 | 4.1 | CAACAATTTTTTGAGA |
| -55 | 5.3 | CCACAATATATTGTGG | ||
| Thermotoga neapolitana DSM 4359 | CTN_0313 | -84 | 4.5 | CAACAATTTATTGAGA |
| -54 | 5.1 | CCACAACATATTGTGG | ||
| Thermotoga petrophila RKU-1 | Tpet_0535 | -91 | 4.1 | CAACAATTTTTTGAGA |
| -61 | 5.3 | CCACAATATATTGTGG | ||
| Thermotoga naphthophila RKU-10 | Tnap_0177 | -85 | 4.1 | CAACAATTTTTTGAGA |
| -55 | 5.3 | CCACAATATATTGTGG | ||
|
Position: -55
Score: 4.8 Sequence: ACACAACATGTGGTAT
Locus tag: TM1286
|
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| TM1286 | -55 | 4.8 | ACACAACATGTGGTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: metE | ||||
| Ortholog function: 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (EC 2.1.1.14) | ||||
| Thermotoga maritima MSB8 | TM1286 | -55 | 4.8 | ACACAACATGTGGTAT |
| -25 | 4.3 | ATACAACAAATGGAGG | ||
| Thermotoga sp. RQ2 | TRQ2_1533 | -55 | 4.8 | ACACAACATGTGGTAT |
| -25 | 4.3 | ATACAACAAATGGAGG | ||
| Thermotoga neapolitana DSM 4359 | CTN_1290 | -55 | 4.8 | ACACAACATGTGGTAT |
| -25 | 4.3 | ATACAACAAATGGAGG | ||
| Thermotoga petrophila RKU-1 | Tpet_1489 | -55 | 4.8 | ACACAACATGTGGTAT |
| -25 | 4.3 | ATACAACAAATGGAGG | ||
| Thermotoga naphthophila RKU-10 | Tnap_1512 | -55 | 4.8 | ACACAACATGTGGTAT |
| -25 | 4.3 | ATACAACAAATGGAGG | ||