Propagation of AraR regulog to Thermotoga maritima MSB8
| Source regulog: | AraR - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermotoga maritima MSB8 |
| Orthologous TF(s) | TM0275 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -62
Score: 6.3 Sequence: ATAATGGTACGTACTTTTAT
Locus tag: TM0276
|
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| TM0276 | -62 | 6.3 | ATAATGGTACGTACTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araA | ||||
| Ortholog function: L-arabinose isomerase (EC 5.3.1.4) | ||||
| Thermotoga maritima MSB8 | TM0276 | -164 | 4.7 | ATAACGGTACGTACCGATGG |
| -62 | 6.3 | ATAATGGTACGTACTTTTAT | ||
| Thermotoga sp. RQ2 | TRQ2_0672 | -164 | 4.7 | ATAACGGTACGTACCGATGG |
| -62 | 6.5 | ATAAAGGTACGTACTTTTAT | ||
| Thermotoga neapolitana DSM 4359 | CTN_0409 | -165 | 4.7 | ATATCGGTACGTACCAGTTG |
| -62 | 6.2 | ATAAAGGTACGTACTTTTGT | ||
| Thermotoga petrophila RKU-1 | Tpet_0648 | -164 | 4.7 | ATAACGGTACGTACCGATGG |
| -62 | 6.5 | ATAAAGGTACGTACTTTTAT | ||
| Thermotoga naphthophila RKU-10 | Tnap_0906 | -164 | 4.7 | ATAACGGTACGTACCGATGG |
| -62 | 6.5 | ATAAAGGTACGTACTTTTAT | ||
|
Position: -44
Score: 5.9 Sequence: AATAATGTACGTACCTAAAT
Locus tag: TM0280
|
||||
| TM0280 | -44 | 5.9 | AATAATGTACGTACCTAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glsA | ||||
| Ortholog function: Putative glycosyl hydrolase of unknown function (DUF1680) | ||||
| Thermotoga maritima MSB8 | TM0280 | -44 | 5.9 | AATAATGTACGTACCTAAAT |
| Thermotoga sp. RQ2 | TRQ2_0668 | -58 | 5.9 | AATAATGTACGTACCTAAAT |
| Thermotoga petrophila RKU-1 | Tpet_0643 | -55 | 5 | GATAATATACGTACCTAAAT |
| Thermotoga naphthophila RKU-10 | Tnap_0910 | -56 | 4.9 | TATAATGTACGTACCTATCA |
| -55 | 5 | GATAATATACGTACCTAAAT | ||