Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraR regulog to Thermotoga maritima MSB8

Reference regulog properties
Source regulog: AraR - Thermotogales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga maritima MSB8
Orthologous TF(s) TM0275
Regulated genes 2
Built upon 35 sites [see more]
Predicted regulatory interactions in Thermotoga maritima MSB8
Locus tag Position Score Sequence
Position: -62
Score: 6.3
Sequence: ATAATGGTACGTACTTTTAT
Locus tag: TM0276
TM0276 -62 6.3 ATAATGGTACGTACTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Thermotoga maritima MSB8 TM0276 -164 4.7 ATAACGGTACGTACCGATGG
-62 6.3 ATAATGGTACGTACTTTTAT
Thermotoga sp. RQ2 TRQ2_0672 -164 4.7 ATAACGGTACGTACCGATGG
-62 6.5 ATAAAGGTACGTACTTTTAT
Thermotoga neapolitana DSM 4359 CTN_0409 -165 4.7 ATATCGGTACGTACCAGTTG
-62 6.2 ATAAAGGTACGTACTTTTGT
Thermotoga petrophila RKU-1 Tpet_0648 -164 4.7 ATAACGGTACGTACCGATGG
-62 6.5 ATAAAGGTACGTACTTTTAT
Thermotoga naphthophila RKU-10 Tnap_0906 -164 4.7 ATAACGGTACGTACCGATGG
-62 6.5 ATAAAGGTACGTACTTTTAT
Position: -44
Score: 5.9
Sequence: AATAATGTACGTACCTAAAT
Locus tag: TM0280
TM0280 -44 5.9 AATAATGTACGTACCTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glsA
Ortholog function: Putative glycosyl hydrolase of unknown function (DUF1680)
Thermotoga maritima MSB8 TM0280 -44 5.9 AATAATGTACGTACCTAAAT
Thermotoga sp. RQ2 TRQ2_0668 -58 5.9 AATAATGTACGTACCTAAAT
Thermotoga petrophila RKU-1 Tpet_0643 -55 5 GATAATATACGTACCTAAAT
Thermotoga naphthophila RKU-10 Tnap_0910 -56 4.9 TATAATGTACGTACCTATCA
-55 5 GATAATATACGTACCTAAAT
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