Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HcpR regulog to Thermotoga naphthophila RKU-10

Reference regulog properties
Source regulog: HcpR - Thermotogales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga naphthophila RKU-10
Orthologous TF(s) Tnap_1598
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Thermotoga naphthophila RKU-10
Locus tag Position Score Sequence
Position: -81
Score: 6.3
Sequence: CTCGTAACAATTGTTACAGA
Locus tag: Tnap_1597
Tnap_1597 -81 6.3 CTCGTAACAATTGTTACAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Thermotoga petrophila RKU-1 Tpet_1577 -81 6.3 CTCGTAACAATTGTTACAGA
Thermotoga naphthophila RKU-10 Tnap_1597 -81 6.3 CTCGTAACAATTGTTACAGA
Position: -28
Score: 6.3
Sequence: TCTGTAACAATTGTTACGAG
Locus tag: Tnap_1598
Tnap_1598 -28 6.3 TCTGTAACAATTGTTACGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcpR
Ortholog function: Transcriptional regulator HcpR, Crp/Fnr family
Thermotoga maritima MSB8 TM1171 -28 6.5 TCTGTAACAATTGTTACGGG
Thermotoga sp. RQ2 TRQ2_1644 -31 6.7 TCCGTAACAATTGTTACGGG
Thermotoga petrophila RKU-1 Tpet_1578 -28 6.3 TCTGTAACAATTGTTACGAG
Thermotoga naphthophila RKU-10 Tnap_1598 -28 6.3 TCTGTAACAATTGTTACGAG
Thermotoga lettingae TMO Tlet_1357 -20 5.6 GCGGTAACATATGATACAGA
Fervidobacterium nodosum Rt17-B1 Fnod_1303 -229 6.5 TCCGTAACCTATGTTACGGA
Petrotoga mobilis SJ95 Pmob_1162 -52 6.2 TCAGTAACAAATGTTACGCA
Thermotogales bacterium TBF 19.5.1 Kole_1156 -28 6.6 TCGGTAACATATGTTACGGA