Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR regulog to Thermotoga naphthophila RKU-10

Reference regulog properties
Source regulog: GalR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector: Galactose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga naphthophila RKU-10
Orthologous TF(s) Tnap_1576
Regulated genes 2
Built upon 19 sites [see more]
Predicted regulatory interactions in Thermotoga naphthophila RKU-10
Locus tag Position Score Sequence
Position: -77
Score: 4.8
Sequence: ACGGTAACTTTCACGG
Position: -65
Score: 5.6
Sequence: ACGGTAACGTTTACGT
Locus tag: Tnap_1576
Tnap_1576 -77 4.8 ACGGTAACTTTCACGG
-65 5.6 ACGGTAACGTTTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: Predicted regulator of galactoside utilization, LacI family
Thermotoga maritima MSB8 TM1200 -51 5.6 ACGGTAACGTTTACGT
Thermotoga sp. RQ2 TRQ2_1618 -51 5.6 ACGGTAACGTTTACGT
Thermotoga neapolitana DSM 4359 CTN_1371 -63 5 CTGTGAACGTTCACGG
-62 5.6 ACGGTAACGTTTACGT
8 4.9 ACATAAACGTTCACGG
Thermotoga petrophila RKU-1 Tpet_1556 -75 5.6 ACGGTAACGTTTACGT
Thermotoga naphthophila RKU-10 Tnap_1576 -65 5.6 ACGGTAACGTTTACGT
Thermotoga lettingae TMO Tlet_0914 -32 5.1 ATGGTAACGTTTACGA
Thermosipho africanus TCF52B THA_1577 -60 4.8 TCGGTAACATTACCGG
Position: -28
Score: 5.3
Sequence: CCGTGAACGTTCACGA
Locus tag: Tnap_1577
Tnap_1577 -28 5.3 CCGTGAACGTTCACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacA
Ortholog function: Beta-galactosidase (EC 3.2.1.23), LacA family
Thermotoga maritima MSB8 TM1195 -53 5.4 ACGTGAACGTTCACGG
Thermotoga sp. RQ2 TRQ2_1623 -52 5.4 ACGTGAACGTTCACGG
Thermotoga neapolitana DSM 4359 CTN_1379 -63 5 CTGTGAACGTTCACGG
-62 5.6 ACGGTAACGTTTACGT
8 4.9 ACATAAACGTTCACGG
Thermotoga petrophila RKU-1 Tpet_1557 -28 5.3 CCGTGAACGTTCACGA
Thermotoga naphthophila RKU-10 Tnap_1577 -28 5.3 CCGTGAACGTTCACGA