Propagation of AraR regulog to Thermotoga naphthophila RKU-10

Reference regulog properties
Source regulog:	AraR - Thermotogales
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Arabinose utilization
Effector:	Arabinose
Phylum:	Thermotogae
Propagated regulon:
Target genome	Thermotoga naphthophila RKU-10
Orthologous TF(s)	Tnap_0905
Regulated genes	3

Built upon 35 sites [see more]

Predicted regulatory interactions in *Thermotoga naphthophila RKU-10*
	Locus tag	Position	Score	Sequence
Position: -62 Score: 6.5 Sequence: ATAAAGGTACGTACTTTTAT Locus tag: Tnap_0906
	Tnap_0906	-62	6.5	ATAAAGGTACGTACTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Thermotoga maritima MSB8	TM0276	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.3	ATAATGGTACGTACTTTTAT
Thermotoga sp. RQ2	TRQ2_0672	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT
Thermotoga neapolitana DSM 4359	CTN_0409	-165	4.7	ATATCGGTACGTACCAGTTG
		-62	6.2	ATAAAGGTACGTACTTTTGT
Thermotoga petrophila RKU-1	Tpet_0648	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT
Thermotoga naphthophila RKU-10	Tnap_0906	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT

Position: -150 Score: 6.5 Sequence: ATAAAAGTACGTACCTTTAT Locus tag: Tnap_0907
	Tnap_0907	-150	6.5	ATAAAAGTACGTACCTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: Predicted arabinosides or arabinose ABC transport system, substrate-binding protein
Thermotoga sp. RQ2	TRQ2_0671	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga neapolitana DSM 4359	CTN_0408	-136	6.2	ACAAAAGTACGTACCTTTAT
		-33	4.7	CAACTGGTACGTACCGATAT
Thermotoga petrophila RKU-1	Tpet_0647	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga petrophila RKU-1	Tpet_0646	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga naphthophila RKU-10	Tnap_0907	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT

Position: -55 Score: 5 Sequence: GATAATATACGTACCTAAAT Locus tag: Tnap_0910
	Tnap_0910	-55	5	GATAATATACGTACCTAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glsA
Ortholog function: Putative glycosyl hydrolase of unknown function (DUF1680)
Thermotoga maritima MSB8	TM0280	-44	5.9	AATAATGTACGTACCTAAAT
Thermotoga sp. RQ2	TRQ2_0668	-58	5.9	AATAATGTACGTACCTAAAT
Thermotoga petrophila RKU-1	Tpet_0643	-55	5	GATAATATACGTACCTAAAT
Thermotoga naphthophila RKU-10	Tnap_0910	-56	4.9	TATAATGTACGTACCTATCA
		-55	5	GATAATATACGTACCTAAAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of AraR regulog to Thermotoga naphthophila RKU-10

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --