Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UgpR regulog to Thermotoga petrophila RKU-1

Reference regulog properties
Source regulog: UgpR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Possibly alpha-mannosides utilization
Effector:
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga petrophila RKU-1
Orthologous TF(s) Tpet_0941
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Thermotoga petrophila RKU-1
Locus tag Position Score Sequence
Position: -30
Score: 6.5
Sequence: ATATGTAAGCGCTTACAGGA
Locus tag: Tpet_0941
Tpet_0941 -30 6.5 ATATGTAAGCGCTTACAGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ugpR
Ortholog function: Predicted regulator of alpha-mannoside utilization, LacI family
Thermotoga maritima MSB8 TM1856 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga neapolitana DSM 4359 CTN_0791 -30 6.2 TTATGTAAGCGCTTACAGGA
Thermotoga petrophila RKU-1 Tpet_0941 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga naphthophila RKU-10 Tnap_0613 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga lettingae TMO Tlet_1033 -208 5.9 TTATGGAAACGATTACATAT
-32 5.9 ATATGAAAAGGATTACACAA
Thermosipho melanesiensis BI429 Tmel_0763 -34 6.2 AATTGTAAACGCTTACAAAG