Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex1 regulog to Thermotoga lettingae TMO

Reference regulog properties
Source regulog: Rex1 - Thermotogales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga lettingae TMO
Orthologous TF(s) Tlet_0951
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Thermotoga lettingae TMO
Locus tag Position Score Sequence
Position: 32
Score: 6.1
Sequence: TCGTGAAATAAATAACGA
Locus tag: Tlet_0957
Tlet_0957 32 6.1 TCGTGAAATAAATAACGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: TM1420
Ortholog function: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Thermosipho melanesiensis BI429 Tmel_0495 -43 5.1 TCGTGAAAAATATAACGT
Thermotoga lettingae TMO Tlet_0957 32 6.1 TCGTGAAATAAATAACGA
Thermotoga maritima MSB8 TM1420 -95 6.6 TTGTGAAGTAGGTAACAA
Thermotoga naphthophila RKU-10 Tnap_1390 -101 6.6 TTGTGAAGTAGGTAACAA
Thermotoga neapolitana DSM 4359 CTN_1072 -101 5.9 TTGTGAATACAGTAACAA
Thermotoga petrophila RKU-1 Tpet_1372 -119 6.6 TTGTGAAGTAGGTAACAA
Thermotoga sp. RQ2 TRQ2_1314 -101 6.6 TTGTGAAGTAGGTAACAA
Position: -30
Score: 5
Sequence: TTGTGAATTTATTAACAG
Locus tag: Tlet_1522
Tlet_1522 -30 5 TTGTGAATTTATTAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: TM1420
Ortholog function: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein
Thermosipho africanus TCF52B THA_782 -49 5 TCGTGAAAATAATAACGT
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