Propagation of Rex regulog to Thermotoga lettingae TMO
| Source regulog: | Rex - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermotoga lettingae TMO |
| Orthologous TF(s) | Tlet_0332 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: 32
Score: 5.2 Sequence: TCGTGAAATAAATAACGA
Locus tag: Tlet_0957
|
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| Tlet_0957 | 32 | 5.2 | TCGTGAAATAAATAACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: TM1420 | ||||
| Ortholog function: Fe-hydrogenase, thioredoxin subunit, 2Fe-2S cluster binding protein | ||||
| Thermotoga maritima MSB8 | TM1420 | -45 | 5 | TaGTGAAAAaTaTaACgt |
| Thermotoga sp. RQ2 | TRQ2_1314 | -51 | 5 | TaGTGAAAAaTaTaACgt |
| Thermotoga neapolitana DSM 4359 | CTN_1072 | -51 | 5 | TaGTGAAAAaTaTaACgt |
| Thermotoga petrophila RKU-1 | Tpet_1372 | -69 | 5 | TaGTGAAAAaTaTaACgt |
| Thermotoga naphthophila RKU-10 | Tnap_1390 | -51 | 5 | TaGTGAAAAaTaTaACgt |
| Thermotoga lettingae TMO | Tlet_0957 | 32 | 5.2 | TcGTGAAAtaaaTaACgA |
| 46 | 4.7 | acGatAAAAaTaTCACgA | ||
| Thermosipho melanesiensis BI429 | Tmel_0495 | -43 | 5 | TcGTGAAAAaTaTaACgt |
| -29 | 4.9 | acGTtAtttaTTTCACgA | ||
|
Position: -30
Score: 4 Sequence: CTGTTATAATTTAATCAA
Locus tag: Tlet_1000
|
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| Tlet_1000 | -30 | 4 | CTGTTATAATTTAATCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnaX | ||||
| Ortholog function: DNA polymerase III subunits gamma and tau | ||||
| Thermotoga maritima MSB8 | TM0686 | -104 | 5.1 | TaGTtAtttTTTTCACgA |
| Thermotoga sp. RQ2 | TRQ2_0243 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga neapolitana DSM 4359 | CTN_1900 | -103 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga petrophila RKU-1 | Tpet_0245 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga naphthophila RKU-10 | Tnap_0482 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga lettingae TMO | Tlet_1000 | -29 | 4 | cTGTtAtAATTTaatCAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_2018 | -90 | 5.4 | TaGTtAAtAaTTTCACAA |
|
Position: -33
Score: 4.9 Sequence: TCGATATTTTTTTCACGA
Locus tag: Tlet_1312
|
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| Tlet_1312 | -33 | 4.9 | TCGATATTTTTTTCACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: TM0983 | ||||
| Ortholog function: conserved hypothetical protein, SirA family | ||||
| Thermotoga maritima MSB8 | TM0983 | -41 | 5.1 | TTGAGATTTTTTTCACAA |
| Thermotoga sp. RQ2 | TRQ2_1812 | -62 | 4.7 | ATGTTATCATTTTCACAA |
| -41 | 5.1 | TTGAGATTTTTTTCACAA | ||
| Thermotoga neapolitana DSM 4359 | CTN_1595 | -32 | 5.1 | TTGAGATTTTTTTCACAA |
| Thermotoga petrophila RKU-1 | Tpet_1758 | -62 | 4.7 | ATGTTATCATTTTCACAA |
| -41 | 5.1 | TTGAGATTTTTTTCACAA | ||
| Thermotoga naphthophila RKU-10 | Tnap_1770 | -63 | 4.7 | ATGTTATCATTTTCACAA |
| Thermotoga lettingae TMO | Tlet_1312 | -34 | 4.9 | TcGatAtttTTTTCACgA |
|
Position: -42
Score: 4.7 Sequence: ATGTGAATACTTTAACAA
Locus tag: Tlet_1350
|
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| Tlet_1350 | -42 | 4.7 | ATGTGAATACTTTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hycD | ||||
| Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) | ||||
| Thermotoga maritima MSB8 | TM0201 | 24 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga sp. RQ2 | TRQ2_0747 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga neapolitana DSM 4359 | CTN_0485 | 0 | 5.1 | TTGAGAATTTTATCACAA |
| Thermotoga petrophila RKU-1 | Tpet_0723 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga naphthophila RKU-10 | Tnap_0831 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga lettingae TMO | Tlet_1350 | -42 | 4.7 | ATGTGAATACTTTAACAA |
| Thermosipho africanus TCF52B | THA_1808 | -106 | 4.7 | TTGTGAtAtaaTTtACtt |
| Thermosipho melanesiensis BI429 | Tmel_1601 | -108 | 4.7 | TTGTGAtAtaaTTtACtt |
| Thermotogales bacterium TBF 19.5.1 | Kole_0172 | -57 | 4.7 | TTGATAGAAAATTCACAA |
|
Position: -30
Score: 4.8 Sequence: TTGTGAATTTATTAACAG
Locus tag: Tlet_1522
|
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| Tlet_1522 | -30 | 4.8 | TTGTGAATTTATTAACAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hycA | ||||
| Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) | ||||
| Thermotoga maritima MSB8 | TM0012 | -27 | 4.3 | aTGTGAAAAaaaTatCAg |
| -2 | 5 | TTGTGAAAAaaTTCcCgA | ||
| Thermotoga sp. RQ2 | TRQ2_0933 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga neapolitana DSM 4359 | CTN_0686 | -61 | 4.3 | ATGTGAAAAAAATATCAG |
| -36 | 5.2 | TTGTGAAAAAATTCTCGA | ||
| Thermotoga petrophila RKU-1 | Tpet_0911 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga naphthophila RKU-10 | Tnap_0643 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga lettingae TMO | Tlet_1522 | -30 | 4.8 | TTGTGAATTTATTAACAG |
| Thermosipho africanus TCF52B | THA_782 | -49 | 4.9 | TcGTGAAAATaaTaACgt |
| -35 | 5 | acGTtAtAtTTTTCACgA | ||
| Thermosipho africanus TCF52B | THA_1559 | -65 | 4.6 | aaGTGAAAtTTTTtACtt |
| 12 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Thermosipho melanesiensis BI429 | Tmel_1172 | -68 | 4.5 | aaGTGAAttTTTTtACtt |
| 9 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_0995 | -38 | 4.8 | ATGTTATAATAATCACGA |
| Petrotoga mobilis SJ95 | Pmob_0726 | -133 | 5.3 | ATGTGAATATTTTCACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_0180 | -71 | 4.6 | aaGTGAAAtaaaTaACAt |