Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraR regulog to Thermotoga lettingae TMO

Reference regulog properties
Source regulog: AraR - Thermotogales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga lettingae TMO
Orthologous TF(s) Tlet_1138
Regulated genes 2
Built upon 35 sites [see more]
Predicted regulatory interactions in Thermotoga lettingae TMO
Locus tag Position Score Sequence
Position: 27
Score: 5.3
Sequence: ATTTATGTACGTACGTTTAC
Locus tag: Tlet_1138
Tlet_1138 27 5.3 ATTTATGTACGTACGTTTAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization operon, GntR family
Thermotoga lettingae TMO Tlet_1138 27 5.3 ATTTATGTACGTACGTTTAC
Position: -169
Score: 5
Sequence: TAATTTGTATGTACATATAT
Locus tag: Tlet_1143
Tlet_1143 -169 5 TAATTTGTATGTACATATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araN-II
Ortholog function: Predicted arabinose ABC transporter, substrate binding protein
Thermotoga sp. RQ2 TRQ2_0661 -233 5.4 CATTTTGTACGTACATATAT
-50 5.7 AAATTGGTACGTACCTATCT
Thermotoga petrophila RKU-1 Tpet_0636 -233 5.4 CATTTTGTACGTACATATAT
-50 5.7 AAATTGGTACGTACCTATCT
Thermotoga lettingae TMO Tlet_1143 -169 5 TAATTTGTATGTACATATAT
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