Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Thermosipho melanesiensis BI429

Reference regulog properties
Source regulog: NrdR - Thermotogales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Thermotogae
Propagated regulon:
Target genome Thermosipho melanesiensis BI429
Orthologous TF(s) Tmel_1376
Regulated genes 1
Built upon 60 sites [see more]
Predicted regulatory interactions in Thermosipho melanesiensis BI429
Locus tag Position Score Sequence
Position: -103
Score: 5.4
Sequence: ACACAATATATAGTAT
Position: -71
Score: 5.5
Sequence: ATACAATATATTGTGG
Locus tag: Tmel_0604
Tmel_0604 -103 5.4 ACACAATATATAGTAT
-71 5.5 ATACAATATATTGTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Anaerobic ribonucleoside-triphosphate reductase (EC 1.17.4.2)
Thermotoga maritima MSB8 TM0385 -85 4.1 CAACAATTTTTTGAGA
-55 5.3 CCACAATATATTGTGG
Thermotoga sp. RQ2 TRQ2_0550 -85 4.1 CAACAATTTTTTGAGA
-55 5.3 CCACAATATATTGTGG
Thermotoga neapolitana DSM 4359 CTN_0312 -84 4.5 CAACAATTTATTGAGA
-54 5.1 CCACAACATATTGTGG
Thermotoga petrophila RKU-1 Tpet_0536 -91 4.1 CAACAATTTTTTGAGA
-61 5.3 CCACAATATATTGTGG
Thermotoga naphthophila RKU-10 Tnap_0176 -85 4.1 CAACAATTTTTTGAGA
-55 5.3 CCACAATATATTGTGG
Thermosipho africanus TCF52B THA_677 -91 5.3 AAACTATATATTGTAT
-59 5.5 ATACAATATATTGTGG
Thermosipho melanesiensis BI429 Tmel_0604 -103 5.4 ACACAATATATAGTAT
-71 5.5 ATACAATATATTGTGG
Fervidobacterium nodosum Rt17-B1 Fnod_1249 -91 5.2 ATACTATATATAGTGT
-61 5.2 ATTCAATATATTGTTT