Propagation of HrcA regulog to Thermosipho melanesiensis BI429
| Source regulog: | HrcA - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermosipho melanesiensis BI429 |
| Orthologous TF(s) | Tmel_0089 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -54
Score: 5.8 Sequence: TTAGCAGTCGATGATTAAGAGTGACAA
Locus tag: Tmel_0053
|
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| Tmel_0053 | -54 | 5.8 | TTAGCAGTCGATGATTAAGAGTGACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: groS | ||||
| Ortholog function: GroES chaperonin | ||||
| Thermotoga maritima MSB8 | TM0505 | -48 | 6.6 | TTAGCAGTCGAATGATGAGAGTGCTAA |
| Thermotoga sp. RQ2 | TRQ2_0431 | -48 | 6.4 | TTAGCAGTCGAACGATGAGAGTGCTAA |
| Thermotoga neapolitana DSM 4359 | CTN_0166 | -52 | 6.2 | TTAGCAGTCATGAGTCGAGAGTGCTAA |
| Thermotoga neapolitana DSM 4359 | CTN_0165 | -52 | 6.2 | TTAGCAGTCATGAGTCGAGAGTGCTAA |
| Thermotoga petrophila RKU-1 | Tpet_0416 | -48 | 6.4 | TTAGCAGTCGAACGATGAGAGTGCTAA |
| Thermotoga naphthophila RKU-10 | Tnap_0286 | -48 | 6.1 | TTAGCAGTCAGACGATGAGAGTGCTAA |
| Thermotoga lettingae TMO | Tlet_0318 | -57 | 6.5 | TTAGCACTCAAACAGTTCGAGTGATAA |
| Thermosipho africanus TCF52B | THA_270 | -53 | 5.9 | TTAGCAGTCAATGAATTAGAGTGACAA |
| Thermosipho melanesiensis BI429 | Tmel_0053 | -54 | 5.8 | TTAGCAGTCGATGATTAAGAGTGACAA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_1544 | -61 | 5.8 | TTAACAAACGGAATATTAGAGTGATAA |
| Petrotoga mobilis SJ95 | Pmob_1157 | -85 | 6.9 | TTAGCACTCTTAATATTTGATTGCTAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_1626 | -71 | 6.3 | TTAGCAGACTCATATAAAGAGTGCTAA |
|
Position: -51
Score: 6.1 Sequence: TTATCAGACATAGCATAAGAGTGATAA
Locus tag: Tmel_0089
|
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| Tmel_0089 | -51 | 6.1 | TTATCAGACATAGCATAAGAGTGATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hrcA | ||||
| Ortholog function: Heat shock response regulator, HrcA family | ||||
| Thermotoga maritima MSB8 | TM0851 | -30 | 6.5 | TTAGCACTCAAAAGAAGGGAGTGCTAA |
| Thermotoga sp. RQ2 | TRQ2_0076 | -30 | 6.5 | TTAGCACTCAAAAGAAGGGAGTGCTAA |
| Thermotoga neapolitana DSM 4359 | CTN_1724 | -28 | 6.6 | TTAGCACTCAAAAGAAAGGAGTGCTAA |
| Thermotoga petrophila RKU-1 | Tpet_0076 | -30 | 6.5 | TTAGCACTCAAAAGAAGGGAGTGCTAA |
| Thermotoga naphthophila RKU-10 | Tnap_0076 | -30 | 6.5 | TTAGCACTCAAAAGAAGGGAGTGCTAA |
| Thermotoga lettingae TMO | Tlet_1782 | -29 | 6.8 | TTAGCACTCAAATGATGAGAGTGATAA |
| Thermosipho africanus TCF52B | THA_306 | -28 | 5.8 | TTATCAGACAAGGATAAAGAGTGATAA |
| Thermosipho melanesiensis BI429 | Tmel_0089 | -51 | 6.1 | TTATCAGACATAGCATAAGAGTGATAA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_1242 | -103 | 5.1 | TTGGCAGATGGATAATAAGTTTGCTAA |
| Petrotoga mobilis SJ95 | Pmob_1823 | -28 | 5.8 | TTAGCACTTAATATGCGGGAGTGATAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_1384 | -28 | 5.6 | TTAGCAGTCTCCAGGGAGGAGTGCTAA |
|
Position: -55
Score: 6.3 Sequence: TTATCAGTCTATATATGTGACTGATAA
Locus tag: Tmel_0413
|
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| Tmel_0413 | -55 | 6.3 | TTATCAGTCTATATATGTGACTGATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpA | ||||
| Ortholog function: Chaperone protein | ||||
| Thermotoga sp. RQ2 | TRQ2_0054 | -51 | 6.3 | TTATCAAACGTAAGATTTAAGTGCTAA |
| Thermotoga neapolitana DSM 4359 | CTN_1702 | -42 | 6.3 | TTATCATTCTTAATAATTAAGTGCTAA |
| Thermotoga petrophila RKU-1 | Tpet_0054 | -51 | 6.6 | TTATCAAACGTAATATTTGAGTGCTAA |
| Thermotoga naphthophila RKU-10 | Tnap_0054 | -51 | 6.6 | TTATCAAACGTAATATTTGAGTGCTAA |
| Thermosipho africanus TCF52B | THA_711 | -54 | 6.6 | TTATCAGTCTAAATATATGACTGATAA |
| Thermosipho melanesiensis BI429 | Tmel_0413 | -55 | 6.3 | TTATCAGTCTATATATGTGACTGATAA |
| Petrotoga mobilis SJ95 | Pmob_1629 | -68 | 6.3 | TTAGCAAATAAAAGTAACGAGTGATAA |
|
Position: -57
Score: 6.5 Sequence: TTATCACTCTTGACAATAGAGTGATAA
Locus tag: Tmel_1128
|
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| Tmel_1128 | -57 | 6.5 | TTATCACTCTTGACAATAGAGTGATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnaK | ||||
| Ortholog function: Chaperone Hsp70 | ||||
| Thermotoga maritima MSB8 | TM0373 | -179 | 5.7 | TTATCATTCAAACATTTCATTTGCTAT |
| Thermotoga sp. RQ2 | TRQ2_0558 | -179 | 5.9 | TTATCATTCAAAAGTTTCATTTGCTAT |
| Thermotoga neapolitana DSM 4359 | CTN_0304 | -174 | 6.2 | TTATCATTCATAAGTTTCGTTTGCTAT |
| Thermotoga petrophila RKU-1 | Tpet_0544 | -179 | 5.9 | TTATCATTCAAAAGTTTCATTTGCTAT |
| Thermotoga naphthophila RKU-10 | Tnap_0168 | -179 | 5.9 | TTATCATTCAAAAGTTTCATTTGCTAT |
| Thermotoga lettingae TMO | Tlet_0014 | -169 | 5.9 | GTATCAGTCTATAATTACGAGTGCTAT |
| Thermosipho africanus TCF52B | THA_1433 | -159 | 5.2 | ATAACAAACTTATGTAACAATTGCTAT |
| -59 | 6.3 | TTATCACTCTTGACAAAAGACTGCTAA | ||
| Thermosipho melanesiensis BI429 | Tmel_1128 | -157 | 5.6 | ATAACAAACGAATGTTACGATTGCTAT |
| -57 | 6.5 | TTATCACTCTTGACAATAGAGTGATAA | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_1209 | -82 | 6.4 | TTATCACTCTTGACAAATGATTGCTAA |
| Petrotoga mobilis SJ95 | Pmob_1649 | -205 | 5.7 | TTTTCACTCTTAGATTAAGAGTGATAT |
| Thermotogales bacterium TBF 19.5.1 | Kole_0886 | -82 | 5.6 | ATGGCAAACTTGACATTCGATTGCTAA |