Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR regulog to Thermotoga neapolitana DSM 4359

Reference regulog properties
Source regulog: GalR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization
Effector: Galactose
Phylum: Thermotogae
Propagated regulon:
Target genome Thermotoga neapolitana DSM 4359
Orthologous TF(s) CTN_1371
Regulated genes 3
Built upon 19 sites [see more]
Predicted regulatory interactions in Thermotoga neapolitana DSM 4359
Locus tag Position Score Sequence
Position: -62
Score: 5.6
Sequence: ACGGTAACGTTTACGT
Locus tag: CTN_1367
CTN_1367 -62 5.6 ACGGTAACGTTTACGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ganE
Ortholog function: Galactose oligosaccharide ABC transporter, substrate binding periplasmic protein
Thermotoga maritima MSB8 TM1204 -51 5.6 ACGGTAACGTTTACGT
Thermotoga sp. RQ2 TRQ2_1614 -51 5.6 ACGGTAACGTTTACGT
Thermotoga neapolitana DSM 4359 CTN_1367 -63 5 CTGTGAACGTTCACGG
-62 5.6 ACGGTAACGTTTACGT
8 4.9 ACATAAACGTTCACGG
Thermotoga petrophila RKU-1 Tpet_1552 -75 5.6 ACGGTAACGTTTACGT
Thermotoga lettingae TMO Tlet_0910 -32 5.1 ATGGTAACGTTTACGA
Position: -63
Score: 5
Sequence: CTGTGAACGTTCACGG
Locus tag: CTN_1372
CTN_1372 -63 5 CTGTGAACGTTCACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: galX
Ortholog function: Predicted galactoside ABC transporter type II, sugar-binding protein
Thermotoga neapolitana DSM 4359 CTN_1372 -63 5 CTGTGAACGTTCACGG
-62 5.6 ACGGTAACGTTTACGT
8 4.9 ACATAAACGTTCACGG
Thermotoga lettingae TMO Tlet_1127 -41 5.4 TCGGTAACGTTACCGT
Fervidobacterium nodosum Rt17-B1 Fnod_0626 -69 4.7 TCGGTTACGTTACCGG