Propagation of AraR regulog to Thermotoga neapolitana DSM 4359

Built upon 35 sites [see more]

Predicted regulatory interactions in *Thermotoga neapolitana DSM 4359*
	Locus tag	Position	Score	Sequence
Position: -136 Score: 6.2 Sequence: ACAAAAGTACGTACCTTTAT Locus tag: CTN_0408
	CTN_0408	-136	6.2	ACAAAAGTACGTACCTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: Predicted arabinosides or arabinose ABC transport system, substrate-binding protein
Thermotoga sp. RQ2	TRQ2_0671	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga neapolitana DSM 4359	CTN_0408	-136	6.2	ACAAAAGTACGTACCTTTAT
		-33	4.7	CAACTGGTACGTACCGATAT
Thermotoga petrophila RKU-1	Tpet_0647	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga petrophila RKU-1	Tpet_0646	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT
Thermotoga naphthophila RKU-10	Tnap_0907	-150	6.5	ATAAAAGTACGTACCTTTAT
		-48	4.7	CCATCGGTACGTACCGTTAT

Position: -62 Score: 6.2 Sequence: ATAAAGGTACGTACTTTTGT Locus tag: CTN_0409
	CTN_0409	-62	6.2	ATAAAGGTACGTACTTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Thermotoga maritima MSB8	TM0276	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.3	ATAATGGTACGTACTTTTAT
Thermotoga sp. RQ2	TRQ2_0672	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT
Thermotoga neapolitana DSM 4359	CTN_0409	-165	4.7	ATATCGGTACGTACCAGTTG
		-62	6.2	ATAAAGGTACGTACTTTTGT
Thermotoga petrophila RKU-1	Tpet_0648	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT
Thermotoga naphthophila RKU-10	Tnap_0906	-164	4.7	ATAACGGTACGTACCGATGG
		-62	6.5	ATAAAGGTACGTACTTTTAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --