Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PuuR regulog to Thermosipho africanus TCF52B

Reference regulog properties
Source regulog: PuuR - Thermotogales
Regulator type: Transcription factor
Regulator family: XRE
Regulation mode:
Biological process: Spermidine biosynthesis
Effector: Putrescine
Phylum: Thermotogae
Propagated regulon:
Target genome Thermosipho africanus TCF52B
Orthologous TF(s) THA_1405
Regulated genes 1
Built upon 16 sites [see more]
Predicted regulatory interactions in Thermosipho africanus TCF52B
Locus tag Position Score Sequence
Position: -36
Score: 5.6
Sequence: TTGTTCAGTATTATAGACAT
Locus tag: THA_1405
THA_1405 -36 5.6 TTGTTCAGTATTATAGACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: puuR
Ortholog function: Predicted transcriptional regulator of spermidine biosynthesis, Xre family
Fervidobacterium nodosum Rt17-B1 Fnod_1325 -134 4.9 TTGTTCACTTAAGTAAACAT
Thermosipho africanus TCF52B THA_1405 -59 4.5 ATGTTCTGTATCATAGACAT
-36 5.6 TTGTTCAGTATTATAGACAT
Thermosipho melanesiensis BI429 Tmel_0572 -32 5.5 TTGTTTAGTATTATAGACAT
Thermotoga lettingae TMO Tlet_0752 -220 5.2 TTGTTGAGGATAATTGACAA
-62 5.5 GTGATCAATATACTGGACAA
Thermotoga maritima MSB8 TM0656 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA
Thermotoga naphthophila RKU-10 Tnap_0452 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA
Thermotoga neapolitana DSM 4359 CTN_0001 -22 4.8 ATGTCTGTGATACTGAACAA
0 6.4 TTGTCAACTATAGTGGTCAA
Thermotoga petrophila RKU-1 Tpet_0275 -22 4.8 ATGTCTGTGATACTGAACAA
0 6.8 TTGTCAACTATAGTGGACAA
Thermotoga sp. RQ2 TRQ2_0273 -58 4.8 ATGTCTGTGATACTGAACAA
-36 6.8 TTGTCAACTATAGTGGACAA
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