Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of UgpR regulog to Thermosipho africanus TCF52B

Reference regulog properties
Source regulog: UgpR - Thermotogales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Possibly alpha-mannosides utilization
Effector:
Phylum: Thermotogae
Propagated regulon:
Target genome Thermosipho africanus TCF52B
Orthologous TF(s) THA_1966
Regulated genes 1
Built upon 9 sites [see more]
Predicted regulatory interactions in Thermosipho africanus TCF52B
Locus tag Position Score Sequence
Position: -172
Score: 6.2
Sequence: ATATGTAAGCGTTTACAAAA
Position: -36
Score: 6.3
Sequence: TAATGTAAACGCTTACAAAA
Locus tag: THA_1964
THA_1964 -172 6.2 ATATGTAAGCGTTTACAAAA
-36 6.3 TAATGTAAACGCTTACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ugpE
Ortholog function: Predicted alpha-mannoside ABC transporter, substrate binding protein
Thermotoga maritima MSB8 TM1855 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga neapolitana DSM 4359 CTN_0790 -30 6.2 TTATGTAAGCGCTTACAGGA
Thermotoga petrophila RKU-1 Tpet_0942 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga naphthophila RKU-10 Tnap_0612 -30 6.5 ATATGTAAGCGCTTACAGGA
Thermotoga lettingae TMO Tlet_1032 -208 5.9 TTATGGAAACGATTACATAT
-32 5.9 ATATGAAAAGGATTACACAA
Thermosipho africanus TCF52B THA_1964 -172 6.2 ATATGTAAGCGTTTACAAAA
-36 6.3 TAATGTAAACGCTTACAAAA