Propagation of Rex regulog to Thermosipho africanus TCF52B
| Source regulog: | Rex - Thermotogales |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Thermotogae |
| Propagated regulon: | |
| Target genome | Thermosipho africanus TCF52B |
| Orthologous TF(s) | THA_1697 |
| Regulated genes | 9 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -96
Score: 5.3 Sequence: TCGTGAAAAAATTAACGA
Position: -29
Score: 5.1 Sequence: TTGTGAAAATATTCACAG
Locus tag: THA_374
|
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| THA_374 | -96 | 5.3 | TCGTGAAAAAATTAACGA | |
| -29 | 5.1 | TTGTGAAAATATTCACAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhA | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent | ||||
| Thermosipho africanus TCF52B | THA_374 | -95 | 5.3 | TcGTGAAAAaaTTaACgA |
| -29 | 5.1 | TTGTGAAAATATTCACAG | ||
| Thermosipho melanesiensis BI429 | Tmel_0139 | -95 | 4.7 | ccGTGAAAAaaaTaACgA |
| -29 | 5.1 | TTGTGAAAATATTCACAG | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_1174 | -78 | 5 | AAGTGATTTTTTTCACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_0742 | -111 | 4.8 | cTGTGAAAAaaTTCACAt |
| -33 | 5.2 | AAGTGAAAAAATTCACAA | ||
|
Position: -35
Score: 4.9 Sequence: TTGTGAATTTTTGCACTA
Locus tag: THA_713
|
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| THA_713 | -35 | 4.9 | TTGTGAATTTTTGCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: TM0179 | ||||
| Ortholog function: hypothetical protein | ||||
| Thermotoga maritima MSB8 | TM0179 | -30 | 4.6 | TTGTTATAATAGTAACAA |
| Thermotoga sp. RQ2 | TRQ2_0769 | -30 | 4.6 | TTGTTATAATAGTAACAA |
| Thermotoga neapolitana DSM 4359 | CTN_0508 | -30 | 4.4 | TTGTTATAATGATATCAA |
| Thermotoga petrophila RKU-1 | Tpet_0745 | -30 | 4.6 | TTGTTATAATAGTAACAA |
| Thermotoga naphthophila RKU-10 | Tnap_0810 | -30 | 4.6 | TTGTTATAATAGTAACAA |
| Thermosipho africanus TCF52B | THA_713 | -35 | 4.9 | TTGTGAATTTTTGCACTA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0241 | -86 | 4.6 | TAGTGAAAAACTTGACAA |
|
Position: -49
Score: 4.9 Sequence: TCGTGAAAATAATAACGT
Position: -35
Score: 5 Sequence: ACGTTATATTTTTCACGA
Locus tag: THA_782
|
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| THA_782 | -49 | 4.9 | TCGTGAAAATAATAACGT | |
| -35 | 5 | ACGTTATATTTTTCACGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hycA | ||||
| Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) | ||||
| Thermotoga maritima MSB8 | TM0012 | -27 | 4.3 | aTGTGAAAAaaaTatCAg |
| -2 | 5 | TTGTGAAAAaaTTCcCgA | ||
| Thermotoga sp. RQ2 | TRQ2_0933 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga neapolitana DSM 4359 | CTN_0686 | -61 | 4.3 | ATGTGAAAAAAATATCAG |
| -36 | 5.2 | TTGTGAAAAAATTCTCGA | ||
| Thermotoga petrophila RKU-1 | Tpet_0911 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga naphthophila RKU-10 | Tnap_0643 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga lettingae TMO | Tlet_1522 | -30 | 4.8 | TTGTGAATTTATTAACAG |
| Thermosipho africanus TCF52B | THA_782 | -49 | 4.9 | TcGTGAAAATaaTaACgt |
| -35 | 5 | acGTtAtAtTTTTCACgA | ||
| Thermosipho africanus TCF52B | THA_1559 | -65 | 4.6 | aaGTGAAAtTTTTtACtt |
| 12 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Thermosipho melanesiensis BI429 | Tmel_1172 | -68 | 4.5 | aaGTGAAttTTTTtACtt |
| 9 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_0995 | -38 | 4.8 | ATGTTATAATAATCACGA |
| Petrotoga mobilis SJ95 | Pmob_0726 | -133 | 5.3 | ATGTGAATATTTTCACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_0180 | -71 | 4.6 | aaGTGAAAtaaaTaACAt |
|
Position: -38
Score: 4.8 Sequence: AAGTTAAATTATTCTCAA
Locus tag: THA_982
|
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| THA_982 | -38 | 4.8 | AAGTTAAATTATTCTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: noxE2 | ||||
| Ortholog function: NADH oxidase (EC 1.6.99.3) | ||||
| Thermosipho africanus TCF52B | THA_982 | -38 | 4.8 | AAGTTAAATTATTCTCAA |
| Thermosipho melanesiensis BI429 | Tmel_0141 | -31 | 5.2 | TAGTTAAAAAAATCACAA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0587 | -65 | 4.5 | aaGTGAAAAaaaTaACtt |
|
Position: -66
Score: 4.6 Sequence: AAGTGAAATTTTTTACTT
Locus tag: THA_1559
|
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| THA_1559 | -66 | 4.6 | AAGTGAAATTTTTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hycA | ||||
| Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycA (EC 1.12.7.2) | ||||
| Thermotoga maritima MSB8 | TM0012 | -27 | 4.3 | aTGTGAAAAaaaTatCAg |
| -2 | 5 | TTGTGAAAAaaTTCcCgA | ||
| Thermotoga sp. RQ2 | TRQ2_0933 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga neapolitana DSM 4359 | CTN_0686 | -61 | 4.3 | ATGTGAAAAAAATATCAG |
| -36 | 5.2 | TTGTGAAAAAATTCTCGA | ||
| Thermotoga petrophila RKU-1 | Tpet_0911 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga naphthophila RKU-10 | Tnap_0643 | -69 | 4.3 | ATGTGAAAAAAATATCAG |
| -44 | 5 | TTGTGAAAAAATTCCCGA | ||
| Thermotoga lettingae TMO | Tlet_1522 | -30 | 4.8 | TTGTGAATTTATTAACAG |
| Thermosipho africanus TCF52B | THA_782 | -49 | 4.9 | TcGTGAAAATaaTaACgt |
| -35 | 5 | acGTtAtAtTTTTCACgA | ||
| Thermosipho africanus TCF52B | THA_1559 | -65 | 4.6 | aaGTGAAAtTTTTtACtt |
| 12 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Thermosipho melanesiensis BI429 | Tmel_1172 | -68 | 4.5 | aaGTGAAttTTTTtACtt |
| 9 | 4.2 | TTGTGAAAAacaTgtCgA | ||
| Fervidobacterium nodosum Rt17-B1 | Fnod_0995 | -38 | 4.8 | ATGTTATAATAATCACGA |
| Petrotoga mobilis SJ95 | Pmob_0726 | -133 | 5.3 | ATGTGAATATTTTCACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_0180 | -71 | 4.6 | aaGTGAAAtaaaTaACAt |
|
Position: -2
Score: 3.9 Sequence: ATATGGAAAAATTAACAA
Locus tag: THA_1606
|
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| THA_1606 | -2 | 3.9 | ATATGGAAAAATTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pgk | ||||
| Ortholog function: Phosphoglycerate kinase (EC 2.7.2.3) | ||||
| Thermotoga maritima MSB8 | TM0689 | -104 | 5.1 | TaGTtAtttTTTTCACgA |
| Thermotoga neapolitana DSM 4359 | CTN_1897 | -103 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga petrophila RKU-1 | Tpet_0242 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga naphthophila RKU-10 | Tnap_0485 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga lettingae TMO | Tlet_0997 | -29 | 4 | cTGTtAtAATTTaatCAA |
| Thermosipho africanus TCF52B | THA_1606 | -44 | 5.2 | TaGTaAAAtTTTTCACgA |
| Thermosipho melanesiensis BI429 | Tmel_1265 | -45 | 5.2 | TaGTaAAAtTTTTCACgA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0739 | -77 | 4.7 | TTGTacAAtTTTTCACgA |
| Petrotoga mobilis SJ95 | Pmob_1444 | -43 | 4.6 | aaGaGAAAAaaaTaACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_2021 | -90 | 5.4 | TaGTtAAtAaTTTCACAA |
|
Position: -44
Score: 5.2 Sequence: TAGTAAAATTTTTCACGA
Locus tag: THA_1607
|
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| THA_1607 | -44 | 5.2 | TAGTAAAATTTTTCACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gap | ||||
| Ortholog function: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | ||||
| Thermotoga maritima MSB8 | TM0688 | -104 | 5.1 | TaGTtAtttTTTTCACgA |
| Thermotoga neapolitana DSM 4359 | CTN_1898 | -103 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga petrophila RKU-1 | Tpet_0243 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga naphthophila RKU-10 | Tnap_0484 | -104 | 5.1 | TAGTTATTTTTTTCACGA |
| Thermotoga lettingae TMO | Tlet_0998 | -29 | 4 | cTGTtAtAATTTaatCAA |
| Thermosipho africanus TCF52B | THA_1607 | -44 | 5.2 | TaGTaAAAtTTTTCACgA |
| Thermosipho melanesiensis BI429 | Tmel_1266 | -45 | 5.2 | TaGTaAAAtTTTTCACgA |
| Fervidobacterium nodosum Rt17-B1 | Fnod_0740 | -77 | 4.7 | TTGTacAAtTTTTCACgA |
| Petrotoga mobilis SJ95 | Pmob_1445 | -43 | 4.6 | aaGaGAAAAaaaTaACAA |
| Thermotogales bacterium TBF 19.5.1 | Kole_2020 | -90 | 5.4 | TaGTtAAtAaTTTCACAA |
|
Position: -107
Score: 4.7 Sequence: TTGTGATATAATTTACTT
Locus tag: THA_1808
|
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| THA_1808 | -107 | 4.7 | TTGTGATATAATTTACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hycD | ||||
| Ortholog function: NAD-reducing Fe-hydrogenase, subunit HycD (EC 1.12.7.2) | ||||
| Thermotoga maritima MSB8 | TM0201 | 24 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga sp. RQ2 | TRQ2_0747 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga neapolitana DSM 4359 | CTN_0485 | 0 | 5.1 | TTGAGAATTTTATCACAA |
| Thermotoga petrophila RKU-1 | Tpet_0723 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga naphthophila RKU-10 | Tnap_0831 | -54 | 5.3 | TTGAGAAATTTATCACAA |
| Thermotoga lettingae TMO | Tlet_1350 | -42 | 4.7 | ATGTGAATACTTTAACAA |
| Thermosipho africanus TCF52B | THA_1808 | -106 | 4.7 | TTGTGAtAtaaTTtACtt |
| Thermosipho melanesiensis BI429 | Tmel_1601 | -108 | 4.7 | TTGTGAtAtaaTTtACtt |
| Thermotogales bacterium TBF 19.5.1 | Kole_0172 | -57 | 4.7 | TTGATAGAAAATTCACAA |