Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of HcpR regulog to Thermosipho africanus TCF52B

Reference regulog properties
Source regulog: HcpR - Thermotogales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nitrosative stress response
Effector: Nitric oxide
Phylum: Thermotogae
Propagated regulon:
Target genome Thermosipho africanus TCF52B
Orthologous TF(s) THA_1108
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Thermosipho africanus TCF52B
Locus tag Position Score Sequence
Position: -79
Score: 6.1
Sequence: TTCGTAACCTATGTTACAGA
Locus tag: THA_824
THA_824 -79 6.1 TTCGTAACCTATGTTACAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Thermotoga maritima MSB8 TM1172 -87 6.5 CCCGTAACAATTGTTACAGA
Thermotoga sp. RQ2 TRQ2_1643 -80 6.7 CCCGTAACAATTGTTACGGA
Thermotoga neapolitana DSM 4359 CTN_1403 -50 6.7 CCCGTAACAATTGTTACGGA
Thermotoga lettingae TMO Tlet_0222 -79 5.7 TTCGTAACAAAAGTTACTGT
Thermosipho africanus TCF52B THA_824 -79 6.1 TTCGTAACCTATGTTACAGA
Fervidobacterium nodosum Rt17-B1 Fnod_1302 -92 6.5 TCCGTAACATAGGTTACGGA
Position: -84
Score: 6.4
Sequence: TCCGTAACTAATGTTACAGA
Locus tag: THA_1919
THA_1919 -84 6.4 TCCGTAACTAATGTTACAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Thermosipho africanus TCF52B THA_1919 -84 6.4 TCCGTAACTAATGTTACAGA
Thermosipho melanesiensis BI429 Tmel_0754 -59 5.9 AGCGTAACATAAGTTACGGA
Petrotoga mobilis SJ95 Pmob_1163 -132 6.2 TGCGTAACATTTGTTACTGA
Thermotogales bacterium TBF 19.5.1 Kole_1154 -86 6.6 TCCGTAACATATGTTACCGA